Het-PDB Navi2 (PDB: 2BE0)

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Ligands
Code	Name		Style	Show	Link
JS5	(2s,3s,4r,5r,6r)-5-amino-2-(aminomethyl)-6-((2r,3r,4r,5s)-5-((1r,2r,3s,5r,6s)-3,5-diamino-2-((2s,3r,4r,5s,6r)-3-amino-4 ,5-dihydroxy-6-(hydroxymethyl)-tetrahydro-2h-pyran-2-yloxy)-6-hydroxycyclohexyloxy)-2-(hydroxymethyl)-4-(2-((R)-piperidi N-3-ylmethylamino)ethoxy)-tetrahydrofuran-3-yloxy)-tetrahydro-2h-pyran-3,4-diol				PoSSuM

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Download interaction data: 2BE0

Code :

2BE0 PDBj RCSB PDB PDBe

Header :

RNA/antibiotic

Title :

Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.

Release Data :

2005-12-20

Compound :

mol_id	molecule	chains
1	5'-R(CPGPCPGPUPCPAPCPAPCPCPGPGPUPGPAPAPGPUPCPGPC)-3'	A,B
	other_details: 16S Rrna A Site

Source :

mol_id	organism_scientific
1	Streptomyces rimosus subsp. paromomycinus (taxid:92743)
	synthetic: yes

Authors :

Francois, B., Westhof, E.

Keywords :

RNA-AMINOGLYCOSIDE INTERACTIONS, A SITE, UOU PAIRS, AA BULGES, RNA-antibiotic complex

Exp. method :

X-RAY DIFFRACTION ( 2.63 Å )

Citation :

Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site

Francois, B.,Szychowski, J.,Adhikari, S.S. et al.
(2004) ANGEW.CHEM.INT.ED.ENGL. 43 : 6735 - 6738

PDB ID: 2BE0