Brand  (β version)

PDB ID: 2WJM

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Ligands
Code Name Style Show Link
BCB Bacteriochlorophyll B PoSSuM
BPB Bacteriopheophytin B PoSSuM
DGA Diacyl glycerol PoSSuM
FE2 Fe (II) ion PoSSuM
HEC Heme C PoSSuM
MPG [(z)-octadec-9-enyl] (2r)-2,3-bis(oxidanyl)propanoate PoSSuM
MQ7 Menaquinone-7 PoSSuM
NS5 15-cis-1,2-dihydroneurosporene PoSSuM
PO4 Phosphate ion PoSSuM
Non-standard Residues
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FME N-formylmethionine
Glycosylation
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Modification
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Structure summary

Code : 2WJM   PDBj   RCSB PDB   PDBe
Header : PHOTOSYNTHESIS
Title : Lipidic sponge phase crystal structure of the photosynthetic reaction centre from Blastochloris viridis (low dose)
Release Data : 2009-09-22
Compound :
mol_id molecule chains synonym
1 PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT C CYTOCHROME C558/C559
mol_id molecule chains synonym
2 REACTION CENTER PROTEIN H CHAIN H PHOTOSYNTHETIC REACTION CENTER H SUBUNIT
mol_id molecule chains synonym
3 REACTION CENTER PROTEIN L CHAIN L PHOTOSYNTHETIC REACTION CENTER L SUBUNIT
mol_id molecule chains synonym
4 REACTION CENTER PROTEIN M CHAIN M PHOTOSYNTHETIC REACTION CENTER M SUBUNIT
Source :
mol_id organism_scientific
1 RHODOPSEUDOMONAS VIRIDIS  (taxid:1079)
atcc: 19567
other_details: DEUTSCHE SAMMLUNG VON MIKROORGANISMEN UND ZELLKULTUREN GMBH (DSMZ)
mol_id organism_scientific
2 RHODOPSEUDOMONAS VIRIDIS  (taxid:1079)
other_details: DEUTSCHE SAMMLUNG VON MIKROORGANISMEN UND ZELLKULTUREN GMBH (DSMZ)
mol_id organism_scientific
3 RHODOPSEUDOMONAS VIRIDIS  (taxid:1079)
other_details: DEUTSCHE SAMMLUNG VON MIKROORGANISMEN UND ZELLKULTUREN GMBH (DSMZ)
mol_id organism_scientific
4 RHODOPSEUDOMONAS VIRIDIS  (taxid:1079)
other_details: DEUTSCHE SAMMLUNG VON MIKROORGANISMEN UND ZELLKULTUREN GMBH (DSMZ)
Authors : Woehri, A.B., Wahlgren, W.Y., Malmerberg, E., Johansson, L.C., Neutze, R., Katona, G.
Keywords : REACTION CENTRE, PHOTOSYNTHESIS, MEMBRANE PROTEIN, LIPIDS, MONOOLEIN, POSTTRANSLATIONAL MODIFICATION, THIOETHER BOND, UBIQUINONE, LIPIDIC SPONGE PHASE
Exp. method : X-RAY DIFFRACTION ( 1.95 Å )
Citation :

Lipidic sponge phase crystal structure of a photosynthetic reaction center reveals lipids on the protein surface.

Wohri, A.B.,Wahlgren, W.Y.,Malmerberg, E.  et al.
(2009)  Biochemistry  48 : 9831 - 9838

PubMed: 19743880
DOI: 10.1021/bi900545e

Reaction

Chain : C
UniProt : P07173 (CYCR_BLAVI)
Reaction : -
Chain : H
UniProt : P06008 (RCEH_BLAVI)
Reaction : -
Cofactor: Evidence: Note:
a bacteriochlorophyll - Binds 4 bacteriochlorophylls per trimer.
a bacteriopheophytin - Binds 2 bacteriopheophytins per trimer.
Fe cation - Binds 1 Fe cation per trimer.
Mg(2+) - Binds 4 Mg(2+) ions per trimer.
a menaquinone - Binds 1 menaquinone per trimer.
a ubiquinone - Binds 1 ubiquinone per trimer.
Chain : L
UniProt : P06009 (RCEL_BLAVI)
Reaction : -
Chain : M
UniProt : P06010 (RCEM_BLAVI)
Reaction : -