Het-PDB Navi2 (PDB: 2RIB)

The number of atoms exceeds 100,000.
So, it can not be displayed here.

Select unit:

Select hetatm:

information

centroid:

interaction residue:

Select chain: Sequence Hide other chain(s)

Data format:

Color scheme of protein:

Ligands
Code	Name		Style	Show	Link
CA	Calcium ion				PoSSuM
GMH	L-glycero-alpha-D-manno-heptopyranose				PoSSuM

Non-standard Residues
Code	Name	Show

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 2RIB

Code :

2RIB PDBj RCSB PDB PDBe

Header :

SUGAR BINDING PROTEIN

Title :

Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with L-glycero-D-manno-heptose

Release Data :

2008-01-15

Compound :

mol_id	molecule	chains	synonym
1	Pulmonary surfactant-associated protein D	A,B,C	SP-D; PSP-D; Lung surfactant protein D
	fragment: neck and carbohydrate recognition domain

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Escherichia coli (taxid:562)
	gene: SFTPD, PSPD, SFTP4 expression_system_strain: ROSETTABLUE expression_system_vector_type: plasmid expression_system_plasmid: PET30A(+)

Authors :

Wang, H., Head, J., Kosma, P., Sheikh, S., McDonald, B., Smith, K., Cafarella, T., Seaton, B., Crouch, E.

Keywords :

SURFACTANT PROTEIN; CARBOHYDRATE RECOGNITION; DOMAIN TRIMERIC, SUGAR BINDING PROTEIN

Exp. method :

X-RAY DIFFRACTION ( 1.800 Å )

Citation :

Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein d.

Wang, H.,Head, J.,Kosma, P. et al.
(2008) Biochemistry 47 : 710 - 720

PDB ID: 2RIB