Het-PDB Navi2 (PDB: 2Q6F)

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Ligands
Code	Name		Style	Show	Link

Non-standard Residues
Code	Name	Show
02J	5-methyl-1,2-oxazole-3-carboxylic acid
PJE	(E,4s)-4-azanyl-5-[(3s)-2-oxidanylidenepyrrolidin-3-yl]pent-2-enoic acid

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show
010	Phenylmethanol

Download interaction data: 2Q6F

Code :

2Q6F PDBj RCSB PDB PDBe

Header :

HYDROLASE

Title :

Crystal structure of infectious bronchitis virus (IBV) main protease in complex with a Michael acceptor inhibitor N3

Release Data :

2008-02-12

Compound :

mol_id	molecule	chains	synonym
1	Infectious bronchitis virus (IBV) main protease	A,B	Fragment
	ec: 3.4.22.-

mol_id	molecule	chains
2	N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE	D,C

Source :

mol_id	organism_scientific	expression_system
1	Infectious bronchitis virus (taxid:11120)	Escherichia coli BL21 (taxid:511693)
	strain: M41 gene: M41 3C-like protease gene expression_system_strain: BL21 expression_system_vector_type: PLASMID expression_system_plasmid: pGEX-4T-1

mol_id	organism_scientific
2	Synthetic construct (taxid:32630)
	synthetic: yes

Authors :

Xue, X.Y., Yang, H.T., Xue, F., Bartlam, M., Rao, Z.H.

Keywords :

coronavirus; IBV; main protease; 3C-Like proteinase; Michael acceptor inhibitor, HYDROLASE

Exp. method :

X-RAY DIFFRACTION ( 2.0 Å )

Citation :

Structures of two coronavirus main proteases: implications for substrate binding and antiviral drug design.

Xue, X.,Yu, H.,Yang, H. et al.
(2008) J.Virol. 82 : 2515 - 2527

PDB ID: 2Q6F