Het-PDB Navi2 (PDB: 2MMQ)

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Ligands
Code	Name		Style	Show	Link

Non-standard Residues
Code	Name	Show
FAG	[1',2'-dideoxy[2-amino-5-([9-hydroxy-aflatoxinb2-8-yl]-formyl-amino)-6-oxo-1,6-ihydro-pyrimidin-4-ylamino]-ribofuranose]-5-monophosphate group

Glycosylation
Code	Name	Emphasize

Modification
Code	Name	Show

Download interaction data: 2MMQ

Code :

2MMQ PDBj RCSB PDB PDBe

Header :

DNA

Title :

Solution structure of AGT FAPY Modified duplex

Release Data :

2015-02-25

Compound :

mol_id	molecule	chains
1	DNA_(5'-D(CPTPAPAP(FAG)PTPTPTPCPA)-3')	A

mol_id	molecule	chains
2	DNA_(5'-D(TPGPAPAPAPCPTPTPAPG)-3')	B

Source :

mol_id	organism_scientific
1
	synthetic: yes

mol_id	organism_scientific
2
	synthetic: yes

Authors :

Li, L., Stone, M.

Keywords :

Aflatoxin B1, FAPY, FORMAMIDOPYRIMIDINE, INTERCALATION, DNA ADDUCT, DEOXYRIBONUCLEIC ACID, HYDROGEN BOND, SEQUENCE DEPENDENCE, AGT, DNA

Exp. method :

SOLUTION NMR

Citation :

DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.

Li, L.,Brown, K.L.,Ma, R. et al.
(2015) Chem.Res.Toxicol. 28 : 225 - 237

PubMed: 25587868
DOI: 10.1021/tx5003832

PDB ID: 2MMQ

Hetero Atom Contents

Structure summary