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Ligands
Code Name Style Show Link
RIO Ribostamycin
SO4 Sulfate ion
Non-standard Residues
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Glycosylation
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Code : 2ET5   PDBj   RCSB PDB   PDBe
Header : RNA
Title : Complex Between Ribostamycin and the 16S-RRNA A-Site
Release Data : 2005-12-13
Compound :
mol_id molecule chains
1 5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3' A,B
Source :
mol_id organism_scientific
1
synthetic: yes
Authors : Westhof, E.
Keywords : RNA-AMINOGLYCOSIDE INTERACTIONS, A SITE, UOU PAIRS, AA BULGES, RNA
Exp. method : X-RAY DIFFRACTION ( 2.2 Å )
Citation :

Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding.

Francois, B.,Russell, R.J.,Murray, J.B.  et al.
(2005)  Nucleic Acids Res.  33 : 5677 - 5690

PubMed: 16214802
DOI: 10.1093/nar/gki862