Brand  (β version)

PDB ID: 2AZ3

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Ligands
Code Name Style Show Link
MG Magnesium ion PoSSuM
CDP Cytidine-5'-diphosphate PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 2AZ3   PDBj   RCSB PDB   PDBe
Header : TRANSFERASE
Title : Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum in complex with CDP
Release Data : 2005-12-20
Compound :
mol_id molecule chains synonym
1 Nucleoside diphosphate kinase A,B,C,D,E,F,G,H,I NDK, NDP kinase, Nucleoside-2-P kinase
ec: 2.7.4.6
Source :
mol_id organism_scientific expression_system
1 Halobacterium salinarum  (taxid:2242) Escherichia coli  (taxid:562)
gene: ndk
expression_system_strain: Bl21[DE3]
expression_system_vector_type: plasmid
expression_system_plasmid: pET15b
Authors : Besir, H., Zeth, K., Bracher, A., Heider, U., Ishibashi, M., Tokunaga, M., Oesterhelt, D.
Keywords : halophilic, TRANSFERASE
Exp. method : X-RAY DIFFRACTION ( 2.20 Å )
Citation :

Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum

Besir, H.,Zeth, K.,Bracher, A.  et al.
(2005)  Febs Lett.  579 : 6595 - 6600

PubMed: 16293253
DOI: 10.1016/j.febslet.2005.10.052

Reaction

Chain : A, B, C, D, E, F, G, H, I
UniProt : P61136 (NDK_HALSA)
Reaction: EC: Evidence:
Physiological Direction:
a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'- deoxyribonucleoside 5'-triphosphate + ADP 2.7.4.6 HAMAP- Rule:MF_00451
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a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'- triphosphate + ADP 2.7.4.6 HAMAP-Rule:MF_00451
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