Het-PDB Navi2 (PDB: 2A04)

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Ligands
Code	Name		Style	Show	Link
NMY	Neomycin				PoSSuM
MG	Magnesium ion				PoSSuM

Non-standard Residues
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Glycosylation
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Download interaction data: 2A04

Code :

2A04 PDBj RCSB PDB PDBe

Header :

RNA

Title :

Molecular Recognition of RNA by Neomycin and a Restricted Neomycin Derivative

Release Data :

2005-09-20

Compound :

mol_id	molecule	chains
1	5'-R(GPUPGPGPUPGPAPAPGPUPCPGPCPGP*G)-3'	A,C
	fragment: Ribosomal RNA A-site

mol_id	molecule	chains
2	5'-R(CPGPCPGPUPCPAPCPAPCPCPAPCPC)-3'	B,D
	fragment: Ribosomal RNA A-site

Source :

mol_id	organism_scientific
1
	synthetic: yes other_details: This sequence occurs naturally in ESCHERICHIA COLI (bacteria) except one residue was removed near 3' terminal

mol_id	organism_scientific
2
	synthetic: yes other_details: This sequence occurs naturally in ESCHERICHIA COLI (bacteria) except one residue was removed near 5' terminal

Authors :

Zhao, Q., Zhao, F., Blount, K.F., Han, Q., Tor, Y., Hermann, T.

Keywords :

Ribosome, RNA, A-site. double helix, neomycin

Exp. method :

X-RAY DIFFRACTION ( 2.95 Å )

Citation :

Molecular recognition of RNA by neomycin and a restricted neomycin derivative

Zhao, F.,Zhao, Q.,Blount, K.F. et al.
(2005) Angew.Chem.Int.Ed.Engl. 44 : 5329 - 5334

PDB ID: 2A04