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Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
A2L 3'-O-methyoxyethyl-adenosine 5'-monophosphate
C2L 5-methyl-3'-O-methoxyethyl cytidine 5'-monophosphate
G2L 3'-O-methyoxyethyl-guanosine-5'-monophosphate
U2L 5-methyl-3'-O-methoxyethyl uridine-5'-monophosphate
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 1XV6   PDBj   RCSB PDB   PDBe
Header : RNA
Title : The solution structure of 2',5'-linked 3'-O-(2-methoxyethyl)-RNA hairpin
Release Data : 2005-04-05
Compound :
mol_id molecule chains synonym
1 5'-R(*(C2L)P*(G2L)P*(C2L)P*(G2L)P*(A2L)P*(A2L)P*(U2L)P*(U2L)P*(C2L)P*(G2L)P*(C2L)P*(G2L))-2' A 2'-MOE RNA
Source :
mol_id organism_scientific
1
synthetic: yes
other_details: solid phase synthesis, phosphoramidite chemistry
Authors : Plevnik, M., Gdaniec, Z., Plavec, J.
Keywords : hairpin, (2', 5')-RNA, 3'-O-(2-methoxyethyl) ribose, RNA
Exp. method : SOLUTION NMR
Citation :

Solution structure of a modified 2',5'-linked RNA hairpin involved in an equilibrium with duplex

Plevnik, M.,Gdaniec, Z.,Plavec, J.
(2005)  Nucleic Acids Res.  33 : 1749 - 1759

PubMed: 15788747
DOI: 10.1093/nar/gki318