Brand  (β version)

PDB ID: 1WUJ

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Ligands
Code Name Style Show Link
F3S Fe3-s4 cluster PoSSuM
MG Magnesium ion PoSSuM
NFO Ni-Fe oxidized active center PoSSuM
SF4 Iron/sulfur cluster PoSSuM
Non-standard Residues
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CSO S-hydroxycysteine
Glycosylation
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Structure summary

Code : 1WUJ   PDBj   RCSB PDB   PDBe
Header : OXIDOREDUCTASE
Title : Three-Dimensional Structure Of The Ni-B State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F
Release Data : 2005-12-07
Compound :
mol_id molecule chains synonym
1 Periplasmic [NiFe] hydrogenase small subunit S NiFe hydrogenlyase small chain
ec: 1.12.2.1
mol_id molecule chains synonym
2 Periplasmic [NiFe] hydrogenase large subunit L NiFe hydrogenlyase large chain
ec: 1.12.2.1
fragment: residues 19-552
Source :
mol_id organism_scientific
1 Desulfovibrio vulgaris str. 'Miyazaki F'  (taxid:883)
strain: Miyazaki F
mol_id organism_scientific
2 Desulfovibrio vulgaris str. 'Miyazaki F'  (taxid:883)
strain: Miyazaki F
Authors : Ogata, H., Hirota, S., Nakahara, A., Komori, H., Shibata, N., Kato, T., Kano, K., Higuchi, Y.
Keywords : High resolution crystal structure, [NiFe]hydrogenase, Oxidoreductase, Ni-B state, Ready state
Exp. method : X-RAY DIFFRACTION ( 1.40 Å )
Citation :

Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state

Ogata, H.,Hirota, S.,Nakahara, A.  et al.
(2005)  Structure  13 : 1635 - 1642

PubMed: 16271886
DOI: 10.1016/j.str.2005.07.018

Reaction

Chain : S
UniProt : P21853 (PHNS_DESVM)
Reaction: EC: Evidence:
Physiological Direction:
2 Fe(III)-[cytochrome c3] + H2 = 2 Fe(II)-[cytochrome c3] + 2 H(+) 1.12.2.1 -
-
Chain : L
UniProt : P21852 (PHNL_DESVM)
Reaction: EC: Evidence:
Physiological Direction:
2 Fe(III)-[cytochrome c3] + H2 = 2 Fe(II)-[cytochrome c3] + 2 H(+) 1.12.2.1 -
-