Brand  (β version)

PDB ID: 1D9D

Hetero Atom Contents

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Code Name Style Show Link
MG Magnesium ion PoSSuM
SO4 Sulfate ion PoSSuM
ZN Zinc ion PoSSuM

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Non-standard Residues
Code Name Show
C31 2'-O-3-aminopropyl cytidine-5'-monophosphate
U31 2'-O-3-aminopropyl 2'-deoxyuridine-5'-monophosphate
Glycosylation
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Modification
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Structure summary

Code : 1D9D   PDBj   RCSB PDB   PDBe
Header : TRANSFERASE/DNA, RNA
Title : CRYSTALL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH SHORT DNA FRAGMENT CARRYING 2'-0-AMINOPROPYL-RNA MODIFICATIONS 5'-D(TCG)-AP(AUC)-3'
Release Data : 1999-12-02
Compound :
mol_id molecule chains
1 5'-D(*TP*CP*GP)-R(AP*(U31)P*(C31))-3' B
other_details: 3'-TERMINAL ADENOSINE, URACIL, AND CYTOSINE NUCLEOTIDES HAVE 3-AMINOPROPYL BOUND TO O2*
mol_id molecule chains synonym
2 DNA POLYMERASE I A POL I, DNA DIRECTED DNA POLYMERASE
ec: 2.7.7.7
fragment: KLENOW FRAGMENT
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific expression_system
2 Escherichia coli  (taxid:562) Escherichia coli  (taxid:562)
Authors : Teplova, M., Wallace, S.T., Tereshko, V., Minasov, G., Simons, A.M., Cook, P.D., Manoharan, M., Egli, M.
Keywords : KLENOW FRAGMENT, 2'-O-AMINOPROPYL NUCLEOTIDES, TRANSFERASE/DNA, RNA COMPLEX, TRANSFERASE-DNA
Exp. method : X-RAY DIFFRACTION ( 2.18 Å )
Citation :

Structural origins of the exonuclease resistance of a zwitterionic RNA.

Teplova, M.,Wallace, S.T.,Tereshko, V.  et al.
(1999)  Proc.Natl.Acad.Sci.USA  96 : 14240 - 14245

PubMed: 10588690
DOI: 10.1073/pnas.96.25.14240

Reaction

Chain : A
UniProt : ?
Reaction : -