Brand  (β version)

PDB ID: 1AGK

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Ligands
Code Name Style Show Link
Non-standard Residues
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R 2'-deoxy-n6-(R)styrene oxide adenosine monophosphate
Glycosylation
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Modification
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Structure summary

Code : 1AGK   PDBj   RCSB PDB   PDBe
Header : DNA
Title : THE SOLUTION NMR STRUCTURE OF AN (R)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE SECOND POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE
Release Data : 1997-08-20
Compound :
mol_id molecule chains
1 DNA (5'-D(*CP*GP*GP*AP*CP*RP*AP*GP*AP*AP*G)-3') A
other_details: (R)-(N6-ADENYL)-STYRENE OXIDE-RAS61-2 DNA ADDUCT
mol_id molecule chains
2 DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3') B
other_details: (R)-(N6-ADENYL)-STYRENE OXIDE-RAS61-2 DNA ADDUCT
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2
synthetic: yes
Authors : Feng, B., Stone, M.P.
Keywords : DNA DUPLEX, B-DNA, HUMAN N-RAS GENE, CODON 61 SEQUENCE, R-STYRENE OXIDE ADDUCT, N6-ADENINE, MAJOR GROOVE, DEOXYRIBONUCLEIC ACID, DNA
Exp. method : SOLUTION NMR
Citation :

Major groove (R)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the R(61,2) and R(61,3) sequence isomers from 1H NMR.

Feng, B.,Zhou, L.,Passarelli, M.  et al.
(1995)  Biochemistry  34 : 14021 - 14036

PubMed: 7578000
DOI: 10.1021/bi00043a008

Solution Structure of an Oligodeoxynucleotide Containing the Human N-Ras Codon 61 Sequence Refined from 1H NMR Using Molecular Dynamics Restrained by Nuclear Overhauser Effects

Feng, B.,Stone, M.P.
(1995)  Chem.Res.Toxicol.  8 : 821