Brand  (β version)

PDB ID: 1WAN

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Ligands
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Non-standard Residues
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D3 1-(2-deoxy-beta-D-ribofuranosyl)-4-(3-benzamido)phenylimidazole
Glycosylation
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Modification
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Structure summary

Code : 1WAN   PDBj   RCSB PDB   PDBe
Header : DNA
Title : DNA DTA TRIPLEX, NMR, 7 STRUCTURES
Release Data : 1996-07-11
Compound :
mol_id molecule chains
1 DNA (5'-D(*AP*GP*AP*TP*AP*GP*AP*AP*CP*CP*CP*CP*TP*TP*CP*TP*AP*TP*CP*TP*TP*AP*TP*AP*TP*CP*TP*(D3)P*TP*CP*TP*T)-3') A
other_details: THE STANDARD DNA BASE AT POSITION 28 HAS BEEN REPLACED BY THE NON-NATURAL SYNTHETIC BASE DP, 1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-4-(3-BENZAMIDO) PHENYLIMIDAZOLE
Source :
mol_id organism_scientific
1
synthetic: yes
Authors : Wang, E., Koshlap, K.M., Gillespie, P., Dervan, P.B., Feigon, J.
Keywords : TRIPLEX, INTERCALATOR, DEOXYRIBONUCLEIC ACID, DNA
Exp. method : SOLUTION NMR
Citation :

Solution structure of a pyrimidine-purine-pyrimidine triplex containing the sequence-specific intercalating non-natural base D3.

Wang, E.,Koshlap, K.M.,Gillespie, P.  et al.
(1996)  J.Mol.Biol.  257 : 1052 - 1069

PubMed: 8632468
DOI: 10.1006/jmbi.1996.0223

Nonnatural Deoxyribonucleoside D3 Incorporated in an Intramolecular DNA Triplex Binds Sequence-Specifically by Intercalation

Koshlap, K.M.,Gillespie, P.,Dervan, P.B.  et al.
(1993)  J.Am.Chem.Soc.  115 : 7908