Brand  (β version)

PDB ID: 1UPM

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Ligands
Code Name Style Show Link
CA Calcium ion PoSSuM
CAP 2-carboxyarabinitol-1,5-diphosphate PoSSuM
Non-standard Residues
Code Name Show
KCX Lysine nz-carboxylic acid
Glycosylation
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Modification
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Structure summary

Code : 1UPM   PDBj   RCSB PDB   PDBe
Header : LYASE
Title : ACTIVATED SPINACH RUBISCO COMPLEXED WITH 2-CARBOXYARABINITOL 2 BISPHOSPHAT AND CA2+.
Release Data : 2003-10-14
Compound :
mol_id molecule chains synonym
1 RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN B,E,H,K,L,O,R,V RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE, RUBISCO LARGE SUBUNIT
ec: 4.1.1.39
mol_id molecule chains synonym
2 RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN C,F,I,M,P,S,T,W RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE, RUBISCO SMALL SUBUNIT
ec: 4.1.1.39
other_details: THE COMPLETE STRUCTURE HAS BEEN SUBMITTED AS WELL AS THE MATRIX TRANSFORMATION FOR EACH CHAIN.
Source :
mol_id organism_scientific organism_common
1 SPINACIA OLERACEA  (taxid:3562) SPINACH
tissue: LEAF
mol_id organism_scientific organism_common
2 SPINACIA OLERACEA  (taxid:3562) SPINACH
organ: LEAF
Authors : Karkehabadi, S., Taylor, T.C., Andersson, I.
Keywords : LYASE, CARBON-CARBON, OXIDOREDUCTASE, PHOTOSYNTHESIS, CARBON-DIOXIDE FIXATION LYASE (CARBON-CARBON)
Exp. method : X-RAY DIFFRACTION ( 2.3 Å )
Citation :

Calcium Supports Loop Closure But not Catalysis in Rubisco

Karkehabadi, S.,Taylor, T.C.,Andersson, I.
(2003)  J.Mol.Biol.  334 : 65

PubMed: 14596800
DOI: 10.1016/J.JMB.2003.09.025

Reaction

Chain : B, E, H, K, L, O, R, V
UniProt : P00875 (RBL_SPIOL)
Reaction: EC: Evidence:
Physiological Direction:
2 (2R)-3-phosphoglycerate + 2 H(+) = CO2 + D-ribulose 1,5- bisphosphate + H2O 4.1.1.39 HAMAP- Rule:MF_01338, PubMed:26197050, PubMed:14596800, PubMed:17740342, PubMed:2118958, PubMed:8648644, PubMed:8955130, PubMed:9034362, PubMed:9092835
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D-ribulose 1,5-bisphosphate + O2 = (2R)-3-phosphoglycerate + 2-phosphoglycolate + 2 H(+) - HAMAP-Rule:MF_01338, PubMed:14596800, PubMed:17740342, PubMed:2118958, PubMed:26197050, PubMed:8648644, PubMed:8955130, PubMed:9034362, PubMed:9092835
-
Chain : C, F, I, M, P, S, T, W
UniProt : Q43832 (RBS2_SPIOL)
Reaction : -