Het-PDB Navi2 (PDB: 1Q9W)

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Ligands
Code	Name		Link
MG	Magnesium ion		PoSSuM
GP1	2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose		PoSSuM
GP4	2-amino-2-deoxy-4-O-phosphono-alpha-D-glucopyranose		PoSSuM
KDO	3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid		PoSSuM
		: Polysaccharide

Non-standard Residues
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Glycosylation
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Download interaction data: 1Q9W

Code :

1Q9W PDBj RCSB PDB PDBe

Header :

IMMUNE SYSTEM

Title :

S45-18 Fab pentasaccharide bisphosphate complex

Release Data :

2004-01-27

Compound :

mol_id	molecule	chains
1	S45-18 Fab (IgG1k) light chain	A,C
	fragment: Fab1 Light chain kappa

mol_id	molecule	chains
2	S45-18 Fab (IgG1k) heavy chain	B,D
	fragment: Fab1 Heavy chain g1

Source :

mol_id	organism_scientific	organism_common
1	Mus musculus (taxid:10090)	House mouse

mol_id	organism_scientific	organism_common
2	Mus musculus (taxid:10090)	House mouse

Authors :

Nguyen, H.P., Seto, N.O., MacKenzie, C.R., Brade, L., Kosma, P., Brade, H., Evans, S.V.

Keywords :

antigen-binding fragment, Fab, anti-cabohydrate, anti-LPS, antibody, immunoglobulin, Kdo, protein-carbohydrate complex, IMMUNE SYSTEM

Exp. method :

X-RAY DIFFRACTION ( 1.75 Å )

Citation :

Germline antibody recognition of distinct carbohydrate epitopes.

Nguyen, H.P.,Seto, N.O.,MacKenzie, C.R. et al.
(2003) Nat.Struct.Biol. 10 : 1019 - 1025

PDB ID: 1Q9W