Het-PDB Navi2 (PDB: 1PWF)

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Ligands
Code	Name		Style	Show	Link
SPM	Spermine				PoSSuM

Non-standard Residues
Code	Name	Show
2MU	2',5-dimethyluridine-5'-monophosphate
FA2	5-(6-amino-9h-purin-9-yl)-4-hydroxytetrahydrofuran-3-yl dihydrogen phosphate

Glycosylation
Code	Name	Emphasize

Modification
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Download interaction data: 1PWF

Code :

1PWF PDBj RCSB PDB PDBe

Header :

DNA

Title :

One Sugar Pucker Fits All: Pairing Versatility Despite Conformational Uniformity in TNA

Release Data :

2004-07-13

Compound :

mol_id	molecule	chains
1	5'-D(GPCPGPTPAP(2MU)P(FA2)PCPGPC)-3'	A,B
	other_details: A-DNA decamer duplex with TNA-adenine and 2'-methoxy-thymine modifications

Source :

mol_id	organism_scientific
1
	synthetic: yes other_details: chemically synthesized oligonucleotide

Authors :

Pallan, P.S., Wilds, C.J., Wawrzak, Z., Krishnamurthy, R., Eschenmoser, A., Egli, M.

Keywords :

A-DNA, Hydrogen Bonding, Nucleic Acid Etiology, Tetrose, Four Carbon Sugar, Nucleic Acid Analogue, DNA

Exp. method :

X-RAY DIFFRACTION ( 1.16 Å )

Citation :

Why does TNA cross-pair more strongly with RNA than with DNA? an answer from X-ray analysis.

Pallan, P.S.,Wilds, C.J.,Wawrzak, Z. et al.
(2003) ANGEW.CHEM.INT.ED.ENGL. 42 : 5893 - 5895

PDB ID: 1PWF