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Ligands
Code Name Style Show Link
CL Chloride ion
QUI 2-carboxyquinoxaline
Non-standard Residues
Code Name Show
DSN D-serine
MVA N-methylvaline
N2C N,S-dimethylcysteine
NCY N-methylcysteine
Glycosylation
Code Name Emphasize
Modification
Code Name Show
Code : 1PFE   PDBj   RCSB PDB   PDBe
Header : DNA/ANTIBIOTIC
Title : Echinomycin-(gcgtacgc)2 complex
Release Data : 2004-06-08
Compound :
mol_id molecule chains
1 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3' A
mol_id molecule chains synonym
2 ECHINOMYCIN B QUINOMYCIN A
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2 STREPTOMYCES ECHINATUS  (taxid:67293)
Authors : Cuesta-Seijo, J.A.
Keywords : BISINTERCALATOR, HOOGSTEEN BASEPAIR, DEPSIPEPTIDE, QUINOXALINE, THIOACETAL, ANTIBIOTIC, ANTITUMOR, DNA-ANTIBIOTIC COMPLEX
Exp. method : X-RAY DIFFRACTION ( 1.10 Å )
Citation :

Structures of Complexes between Echinomycin and Duplex DNA.

Cuesta-Seijo, J.A.,Sheldrick, G.M.
(2005)  Acta Crystallogr.,Sect.D  61 : 442

PubMed: 15805599
DOI: 10.1107/S090744490500137X