Brand  (β version)

PDB ID: 1PDT

Hetero Atom Contents

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Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
APN 2-aminoethylglycine-carbonylmethylene-adenine
CPN 2-aminoethylglycine-carbonylmethylene-cytosine
GPN 2-aminoethylglycine-carbonylmethylene-guanine
TPN 2-aminoethylglycine-carbonylmethylene-thymine
Glycosylation
Code Name Emphasize
Modification
Code Name Show
NH2 Amino group

Structure summary

Code : 1PDT   PDBj   RCSB PDB   PDBe
Header : PEPTIDE NUCLEIC ACID/DNA
Title : PD235, PNA-DNA DUPLEX, NMR, 8 STRUCTURES
Release Data : 1996-10-14
Compound :
mol_id molecule chains
1 DNA (5'-D(*GP*AP*CP*AP*TP*AP*GP*C)-3' A
mol_id molecule chains synonym
2 PEPTIDE NUCLEIC ACID (COOH-P(*G*C*T*A*T*G*T*C)-NH2) B PNA
other_details: PNA-DNA DUPLEX
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2
synthetic: yes
Authors : Eriksson, M., Nielsen, P.E.
Keywords : COMPLEX (PEPTIDE NUCLEIC ACID-DNA), NUCLEIC ACID COMPLEX, DUPLEX, HYBRID, PEPTIDE NUCLEIC ACID-DNA complex
Exp. method : SOLUTION NMR
Citation :

Solution structure of a peptide nucleic acid-DNA duplex.

Eriksson, M.,Nielsen, P.E.
(1996)  Nat.Struct.Biol.  3 : 410 - 413

PubMed: 8612069
DOI: 10.1038/nsb0596-410

Structural Characterization of Pna-DNA Duplexes by NMR. Evidence for DNA in a B-Like Conformation

Leijon, M.,Graslund, A.,Nielsen, P.E.  et al.
(1994)  Biochemistry  33 : 9820