Het-PDB Navi2 (PDB: 1LOJ)

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Ligands
Code	Name	Link
U	Uridine-5'-monophosphate	PoSSuM
MPD	(4s)-2-methyl-2,4-pentanediol	PoSSuM
URI	Uridine	PoSSuM

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Download interaction data: 1LOJ

Code :

1LOJ PDBj RCSB PDB PDBe

Header :

RNA BINDING PROTEIN, transcription

Title :

Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP)

Release Data :

2003-03-25

Compound :

mol_id	molecule	chains	synonym
1	small nuclear ribonucleoprotein homolog (Sm-like)	A,B,C,D,E,F,G,H,I,J,K,L,M,N	Sm-like archaeal protein SmAP1; Putative snRNP Sm-like protein
	other_details: full-length SmAP1 with additional 5-6 residues appended to the C-terminus (artefact of cloning vector)

Source :

mol_id	organism_scientific	expression_system
1	Methanothermobacter thermautotrophicus str. Delta H (taxid:187420)	Escherichia coli BL21(DE3) (taxid:469008)
	strain: delta H gene: Mth649 expression_system_strain: BL21(DE3) expression_system_vector_type: plasmid expression_system_plasmid: pET-22b(+)

Authors :

Mura, C., Kozhukhovsky, A., Eisenberg, D.

Keywords :

beta barrel, OB-fold, heptameric toroid, tetradecamer, RNA BINDING PROTEIN, transcription

Exp. method :

X-RAY DIFFRACTION ( 1.90 Å )

Citation :

The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs)

Mura, C.,Kozhukhovsky, A.,Gingery, M. et al.
(2003) Protein Sci. 12 : 832 - 847

The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core

Mura, C.,Cascio, D.,Sawaya, M.R. et al.
(2001) Proc.Natl.Acad.Sci.USA 98 : 5532 - 5537

PDB ID: 1LOJ