Brand  (β version)

color scheme of protein:

hetatm:

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information
centroid:
interaction residue:

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Ligands
Code Name Link
U Uridine-5'-monophosphate
MPD (4s)-2-methyl-2,4-pentanediol
URI Uridine
Code : 1LOJ
Header : RNA BINDING PROTEIN, transcription
Title : Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP)
Release Data : 2003-03-25
Compound :
mol_id molecule chains synonym
1 small nuclear ribonucleoprotein homolog (Sm-like) A,B,C,D,E,F,G,H,I,J,K,L,M,N Sm-like archaeal protein SmAP1; Putative snRNP Sm-like protein
other_details: full-length SmAP1 with additional 5-6 residues appended to the C-terminus (artefact of cloning vector)
Source :
mol_id organism_scientific expression_system
1 Methanothermobacter thermautotrophicus str. Delta H  (taxid:187420) Escherichia coli BL21(DE3)  (taxid:469008)
strain: delta H
gene: Mth649
expression_system_strain: BL21(DE3)
expression_system_vector_type: plasmid
expression_system_plasmid: pET-22b(+)
Authors : Mura, C., Kozhukhovsky, A., Eisenberg, D.
Keywords : beta barrel, OB-fold, heptameric toroid, tetradecamer, RNA BINDING PROTEIN, transcription
Exp. method : X-RAY DIFFRACTION ( 1.90 Å )
Citation :

The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs)

Mura, C.,Kozhukhovsky, A.,Gingery, M.  et al.
(2003)  Protein Sci.  12 : 832 - 847

PubMed: 12649441
DOI: 10.1110/ps.0224703

The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core

Mura, C.,Cascio, D.,Sawaya, M.R.  et al.
(2001)  Proc.Natl.Acad.Sci.USA  98 : 5532 - 5537

DOI: 10.1073/pnas.091102298

Chain : A, B, C, D, E, F, G, H, I, J, K, L, M, N
UniProt : O26745 (RUXX_METTH)
Reaction : -