Het-PDB Navi2 (PDB: 1GGY)

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Ligands
Code	Name		Style	Show	Link
YB	Ytterbium (III) ion				PoSSuM

Non-standard Residues
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Glycosylation
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Download interaction data: 1GGY

Code :

1GGY PDBj RCSB PDB PDBe

Header :

TRANSFERASE

Title :

HUMAN FACTOR XIII WITH YTTERBIUM BOUND IN THE ION SITE

Release Data :

1999-02-16

Compound :

mol_id	molecule	chains
1	PROTEIN (COAGULATION FACTOR XIII)	A,B
	ec: 2.3.2.13 fragment: FULL LENGTH other_details: YTTERBIUM SOAKED INTO CRYSTAL

Source :

mol_id	organism_scientific	organism_common	expression_system
1	Homo sapiens (taxid:9606)	Human	Saccharomyces cerevisiae (taxid:4932)
	expression_system_common: Baker's yeast

Authors :

Fox, B.A., Yee, V.C., Pederson, L.C., Trong, I.L., Bishop, P.D., Stenkamp, R.E., Teller, D.C.

Keywords :

TRANSGLUTAMINASE, BLOOD COAGULATION, YTTERBIUM, TRANSFERASE

Exp. method :

X-RAY DIFFRACTION ( 2.50 Å )

Citation :

Identification of the calcium binding site and a novel ytterbium site in blood coagulation factor XIII by x-ray crystallography.

Fox, B.A.,Yee, V.C.,Pedersen, L.C. et al.
(1999) J.Biol.Chem. 274 : 4917 - 4923

Chain :

A, B

UniProt :

P00488 (F13A_HUMAN)

Reaction:	EC:	Evidence:
Reaction:	Physiological Direction:	Evidence:
L-glutaminyl-[protein] + L-lysyl-[protein] = [protein]-L- lysyl-N(6)-5-L-glutamyl-[protein] + NH4(+)	2.3.2.13	PROSITE- ProRule:PRU10024, PubMed:27363989
	-	PROSITE- ProRule:PRU10024, PubMed:27363989

PDB ID: 1GGY