Brand  (β version)

PDB ID: 1G5K

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Ligands
Code Name Style Show Link
PGA 2-phosphoglycolic acid PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 1G5K   PDBj   RCSB PDB   PDBe
Header : DNA
Title : NMR Structrure of D(CCAAAGXACTGGG), X is a 3'-phosphoglycolate, 5'-phosphate gapped lesion, 10 structures
Release Data : 2003-01-07
Compound :
mol_id molecule chains
1 5'-D(*CP*CP*AP*AP*AP*G)-3' A
mol_id molecule chains
2 5'-D(P*AP*CP*TP*GP*GP*G)-3' B
mol_id molecule chains
3 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' C
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2
synthetic: yes
mol_id organism_scientific
3
synthetic: yes
Authors : Junker, H.-D., Hoehn, S.T., Bunt, R.C., Marathius, V., Chen, J., Turner, C.J., Stubbe, J.
Keywords : DNA, bleomycin, phosphoglycolate
Exp. method : SOLUTION NMR
Citation :

Synthesis, Characterization and Solution Structure of Tethered Oligonucleotides Containing an Internal 3'-Phosphoglycolate, 5'-Phosphate Gapped Lesion

Junker, H.-D.,Hoehn, S.T.,Bunt, R.C.  et al.
(2002)  Nucleic Acids Res.  30 : 5497 - 5508

PubMed: 12490718
DOI: 10.1093/nar/gkf681