Brand  (β version)

PDB ID: 1FIR

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Ligands
Code Name Style Show Link
MG Magnesium ion PoSSuM
NA Sodium ion PoSSuM
Non-standard Residues
Code Name Show
12A 2-methylthio-n6-(aminocarbonyl-L-threonyl)-adenosine-5'-monophosphate
1MA 6-hydro-1-methyladenosine-5'-monophosphate
2MG 2n-methylguanosine-5'-monophosphate
2MU 2',5-dimethyluridine-5'-monophosphate
5MC 5-methylcytidine-5'-monophosphate
70U 5-(O-methylaceto)-2-thio-2-deoxy-uridine-5'-monophosphate
7MG 7n-methyl-8-hydroguanosine-5'-monophosphate
H2U 5,6-dihydrouridine-5'-monophosphate
PSU Pseudouridine-5'-monophosphate
Glycosylation
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Modification
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Structure summary

Code : 1FIR   PDBj   RCSB PDB   PDBe
Header : RNA
Title : CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3)
Release Data : 2001-01-17
Compound :
mol_id molecule chains
1 HIV-1 REVERSE TRANSCRIPTION PRIMER TRNA(LYS3) A
Source :
mol_id organism_scientific organism_common
1 Bos taurus  (taxid:9913) Cattle
other_details: THIS SEQUENCE OCCURS NATURALLY IN HUMANS, BOVINES AND CHICKENS
Authors : Benas, P., Dumas, P.
Keywords : mammalian transfert ribonucleic acid, HIV-1 primer tRNA, amino acid transport, canonical tRNA structure, canonical anticodon, frameshifting, codon/anticodon mimicry, modified bases, RNA
Exp. method : X-RAY DIFFRACTION ( 3.30 Å )
Citation :

The crystal structure of HIV reverse-transcription primer tRNA(Lys,3) shows a canonical anticodon loop.

Benas, P.,Bec, G.,Keith, G.  et al.
(2000)  RNA  6 : 1347 - 1355

PubMed: 11073212
DOI: 10.1017/S1355838200000911

Molecular blocs in tRNAs that could prevent +1 frameshifting

Benas, P.,Dumas, P.
(2000)  To be Published 

Studies on the ternary initiation complex of HIV-1 reverse transcription and crystallographic structures of two partners

Benas, P.
(2000)  Thesis  : 1 - 313