Brand  (β version)

PDB ID: 1DV4

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Ligands
Code Name Style Show Link
WO2 Octadecatungstenyl diphosphate PoSSuM
Non-standard Residues
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N Any 5'-monophosphate nucleotide
Glycosylation
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Structure summary

Code : 1DV4   PDBj   RCSB PDB   PDBe
Header : RIBOSOME
Title : PARTIAL STRUCTURE OF 16S RNA OF THE SMALL RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Release Data : 2000-02-02
Compound :
mol_id molecule chains
1 16S RIBOSOMAL RNA A
mol_id molecule chains synonym
2 RIBOSOMAL PROTEIN S5 E BS5
fragment: RESIDUES 4-148
mol_id molecule chains
3 RIBOSOMAL PROTEIN S7 G
fragment: RESIDUES 12-146
Source :
mol_id organism_scientific
1 Thermus thermophilus  (taxid:274)
mol_id organism_scientific
2 Geobacillus stearothermophilus  (taxid:1422)
mol_id organism_scientific
3 Thermus thermophilus  (taxid:274)
Authors : Tocilj, A., Schlunzen, F., Janell, D., Gluhmann, M., Hansen, H., Harms, J., Bashan, A., Bartels, H., Agmon, I., Franceschi, F., Yonath, A.
Keywords : RIBOSOMES, 30S, THERMUS THERMOPHILUS, 16S RNA, RIBOSOME
Exp. method : X-RAY DIFFRACTION ( 4.50 Å )
Citation :

The small ribosomal subunit from Thermus thermophilus at 4.5 A resolution: pattern fittings and the identification of a functional site.

Tocilj, A.,Schlunzen, F.,Janell, D.  et al.
(1999)  Proc.Natl.Acad.Sci.USA  96 : 14252 - 14257

PubMed: 10588692
DOI: 10.1073/pnas.96.25.14252

The structure of ribosomal protein-S5 reveals sites of interaction with 16S ribosomal-RNA

Ramakrishnan, V.,White, S.
(1992)  Nature  358 : 768 - 771

DOI: 10.1038/358768a0

The structure of ribosomal protein S7 at 1.9 angstrom resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids

Wimberly, B.T.,White, S.,Ramakrishnan, V.
(1997)  Structure  5 : 1187 - 1198

DOI: 10.1016/S0969-2126(97)00269-4

The structure of the 9(18)-heteropoly anion in potassium 9(18)-tungstophosphate, K6(P2W18O62).14H2O

Dawson, B.
(1953)  Acta Crystallogr.  6 : 113 - 126

DOI: 10.1107/S0365110X53000466

Reaction

Chain : E
UniProt : P02357 (RS5_GEOSE)
Reaction : -
Chain : G
UniProt : P17291 (RS7_THET8)
Reaction : -