Brand  (β version)

PDB ID: 1AGO

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
Y 2'-deoxy-n6-(S)styrene oxide adenosine monophosphate
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 1AGO   PDBj   RCSB PDB   PDBe
Header : DNA
Title : THE SOLUTION NMR STRUCTURE OF AN (S)-A-(N6-ADENYL)-STYRENE OXIDE-RAS61 OLIGODEOXYNUCLEOTIDE MODIFIED AT THE THIRD POSITION OF THE CODON 61 REGION, MINIMIZED AVERAGE STRUCTURE
Release Data : 1997-08-20
Compound :
mol_id molecule chains
1 DNA (5'-D(*CP*GP*GP*AP*CP*AP*YP*GP*AP*AP*G)-3') A
other_details: (S)-(N6-ADENYL)-STYRENE OXIDE-RAS61-3 DNA ADDUCT
mol_id molecule chains
2 DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3') B
other_details: (S)-(N6-ADENYL)-STYRENE OXIDE-RAS61-3 DNA ADDUCT
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2
synthetic: yes
Authors : Feng, B., Stone, M.P.
Keywords : DNA DUPLEX, B-DNA, HUMAN N-RAS GENE, CODON 61 SEQUENCE, S-STYRENE OXIDE ADDUCT, N6-ADENINE ADDUCT, MAJOR GROOVE ADDUCT, DEOXYRIBONUCLEIC ACID, DNA
Exp. method : SOLUTION NMR
Citation :

Major groove (S)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the S(61,2) and S(61,3) sequence isomers from 1H NMR.

Feng, B.,Voehler, M.,Zhou, L.  et al.
(1996)  Biochemistry  35 : 7316 - 7329

PubMed: 8652508
DOI: 10.1021/bi952526f

Solution Structure of an Oligodeoxynucleotide Containing the Human N-Ras Codon 61 Sequence Refined from 1H NMR Using Molecular Dynamics Restrained by Nuclear Overhauser Effects

Feng, B.,Stone, M.P.
(1995)  Chem.Res.Toxicol.  8 : 821