Brand  (β version)

PDB ID: 1AG5

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Ligands
Code Name Style Show Link
AFN 8,9-dihydro-9-hydroxy-aflatoxin b1 PoSSuM
Non-standard Residues
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Glycosylation
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Structure summary

Code : 1AG5   PDBj   RCSB PDB   PDBe
Header : DNA
Title : THE SOLUTION STRUCTURE OF AN AFLATOXIN B1 EPOXIDE ADDUCT AT THE N7 POSITION OF GUANINE OPPOSITE AN ADENINE IN THE COMPLEMENTARY STRAND OF AN OLIGODEOXYNUCLEOTIDE DUPLEX, NMR, MINIMIZED AVERAGE STRUCTURE
Release Data : 1997-09-17
Compound :
mol_id molecule chains
1 DNA (5'-D(*CP*CP*AP*TP*CP*GP*AP*TP*CP*C)-3') A
other_details: 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXYAFLATOXIN B1 OPPOSITE CPA IN THE COMPLEMENTARY STRAND
mol_id molecule chains
2 DNA (5'-D(*GP*GP*AP*TP*CP*AP*GP*AP*TP*GP*G)-3') B
other_details: 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXYAFLATOXIN B1 OPPOSITE CPA IN THE COMPLEMENTARY STRAND
Source :
mol_id organism_scientific
1 Synthetic construct  (taxid:32630)
synthetic: yes
mol_id organism_scientific
2 Synthetic construct  (taxid:32630)
synthetic: yes
Authors : Johnson, D.S., Stone, M.P.
Keywords : AFLATOXIN B1, N7-GUANINE ADDUCT, INTERCALATION, DNA DUPLEX, DEOXYRIBONUCLEIC ACID, DNA
Exp. method : SOLUTION NMR
Citation :

Refined solution structure of 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 opposite CpA in the complementary strand of an oligodeoxynucleotide duplex as determined by 1H NMR.

Johnston, D.S.,Stone, M.P.
(1995)  Biochemistry  34 : 14037 - 14050

PubMed: 7578001
DOI: 10.1021/bi00043a009