Brand  (β version)

PDB ID: 1AG3

Hetero Atom Contents

  The number of atoms exceeds 100,000.
  So, it can not be displayed here.

Select unit:

Select chain:   Sequence  

Data format:   

Color scheme of protein:

Ligands
Code Name Style Show Link
Non-standard Residues
Code Name Show
P 2'-deoxy-n1,n2-propano guanosine monophosphate
Glycosylation
Code Name Emphasize
Modification
Code Name Show

Structure summary

Code : 1AG3   PDBj   RCSB PDB   PDBe
Header : DNA
Title : DUPLEX OLIGODEOXYNUCLEOTIDE CONTAINING PROPANODEOXYGUANOSINE OPPOSITE A TWO-BASE DELETION, NMR, MINIMIZED AVERAGE STRUCTURE
Release Data : 1997-07-07
Compound :
mol_id molecule chains
1 DNA (5'-D(*AP*TP*CP*GP*CP*PP*CP*GP*GP*CP*AP*TP*G)-3') A
other_details: DUPLEX OLIGODEOXYNUCLEOTIDE CONTAINING PROPANODEOXYGUANOSINE OPPOSITE A TWO-BASE DELETION
mol_id molecule chains
2 DNA (5'-D(*CP*AP*TP*GP*CP*CP*GP*CP*GP*AP*T)-3') B
other_details: DUPLEX OLIGODEOXYNUCLEOTIDE CONTAINING PROPANODEOXYGUANOSINE OPPOSITE A TWO-BASE DELETION
Source :
mol_id organism_scientific
1
synthetic: yes
mol_id organism_scientific
2
synthetic: yes
Authors : Weisenseel, J.P., Stone, M.P.
Keywords : DNA ADDUCTS, DNA CONFORMATION, NMR SPECTROSCOPY, STRUCTURAL REFINEMENT, PROPANODEOXYGUANOSINE, SALMONELLA TYPHIMURIUM HISD3052, DEOXYRIBONUCLEIC ACID, DNA
Exp. method : SOLUTION NMR
Citation :

Structure of a duplex oligodeoxynucleotide containing propanodeoxyguanosine opposite a two-base deletion in the (CpG)3 frame shift hotspot of Salmonella typhimurium hisD3052 determined by 1H NMR and restrained molecular dynamics.

Weisenseel, J.P.,Moe, J.G.,Reddy, G.R.  et al.
(1995)  Biochemistry  34 : 50 - 64

PubMed: 7819223
DOI: 10.1021/bi00001a007

1H NMR Characterization of a Duplex Oligodeoxynucleotide Containing Propanodeoxyguanosine Opposite a Two-Base Deletion in the (Cpg)3 Frameshift Hotspot of Salmonella Typhimurium Hisd3052

Moe, J.G.,Reddy, G.R.,Marnett, L.J.  et al.
(1994)  Chem.Res.Toxicol.  7 : 319