ID 6MTNB STANDARD; PRT; 153 AA. DT CONVERTED FROM PDB (SEQRES) 6MTN DE Envelope glycoprotein gp160 OS Human immunodeficiency virus 1 CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.500 CC R-Factor 0.225 FT #SUB 16 527 GLY B 110 98 ARG D Protein B 3 FT #SUB 18 529 THR B 110 98 ARG D Protein S 2 FT #SUB 109 620 SER B 109 97 LEU D Protein A 3 FT #SUB 113 624 ASP B 109 97 LEU D Protein B 1 FT #SUB 113 624 ASP B 110 98 ARG D Protein B 3 FT #SUB 113 624 ASP B 111 99 ASP D Protein A 11 FT #SUB 113 624 ASP B 112 100 GLY D Protein S 2 FT #SUB 114 625 ASN B 32 32 TYR D Protein S 4 FT #SUB 114 625 ASN B 109 97 LEU D Protein S 1 FT #SUB 114 625 ASN B 110 98 ARG D Protein B 4 FT #SUB 116 627 THR B 110 98 ARG D Protein S 1 FT #SUB 119 630 GLN B 81 72H PHE D Protein A 7 FT #SUB 109 620 SER B 52 49 TYR E Protein S 1 FT #SUB 110 621 GLU B 59 56 PRO E Protein S 2 FT #SUB 9 520 LEU B 54 84 ILE G Protein B 1 FT #SUB 11 522 PHE B 54 84 ILE G Protein B 4 FT #SUB 11 522 PHE B 214 244 THR G Protein B 1 FT #SUB 12 523 LEU B 13 43 PRO G Protein S 2 FT #SUB 12 523 LEU B 15 45 TRP G Protein S 2 FT #SUB 12 523 LEU B 56 86 LEU G Protein B 2 FT #SUB 12 523 LEU B 459 491 ILE G Protein S 1 FT #SUB 15 526 ALA B 13 43 PRO G Protein B 1 FT #SUB 15 526 ALA B 15 45 TRP G Protein S 2 FT #SUB 15 526 ALA B 59 89 VAL G Protein A 2 FT #SUB 16 527 GLY B 57 87 GLU G Protein B 2 FT #SUB 16 527 GLY B 58 88 ASN G Protein B 1 FT #SUB 16 527 GLY B 59 89 VAL G Protein B 2 FT #SUB 19 530 MET B 465 497 ALA G Protein S 1 FT #SUB 22 533 ALA B 13 43 PRO G Protein S 2 FT #SUB 23 534 SER B 9 39 TYR G Protein S 2 FT #SUB 26 537 LEU B 10 40 TYR G Protein S 1 FT #SUB 26 537 LEU B 11 41 GLY G Protein A 3 FT #SUB 29 540 GLN B 11 41 GLY G Protein S 3 FT #SUB 29 540 GLN B 13 43 PRO G Protein S 2 FT #SUB 33 544 LEU B 10 40 TYR G Protein S 3 FT #SUB 33 544 LEU B 191 221 ALA G Protein B 1 FT #SUB 33 544 LEU B 192 222 GLY G Protein B 1 FT #SUB 33 544 LEU B 461 493 PRO G Protein S 2 FT #SUB 34 545 LEU B 191 221 ALA G Protein B 3 FT #SUB 35 546 SER B 191 221 ALA G Protein B 2 FT #SUB 37 548 ILE B 23 53 PHE G Protein S 2 FT #SUB 37 548 ILE B 45 75 VAL G Protein S 1 FT #SUB 37 548 ILE B 46 76 PRO G Protein S 1 FT #SUB 38 549 VAL B 23 53 PHE G Protein A 4 FT #SUB 38 549 VAL B 190 220 PRO G Protein S 2 FT #SUB 38 549 VAL B 191 221 ALA G Protein S 1 FT #SUB 58 569 THR B 43 73 ALA G Protein S 1 FT #SUB 58 569 THR B 84 114 GLN G Protein A 6 FT #SUB 59 570 VAL B 80 110 SER G Protein S 1 FT #SUB 59 570 VAL B 81 111 LEU G Protein S 2 FT #SUB 59 570 VAL B 84 114 GLN G Protein A 3 FT #SUB 60 571 TRP B 24 54 CYS G Protein S 7 FT #SUB 60 571 TRP B 39 69 TRP G Protein S 3 FT #SUB 60 571 TRP B 40 70 ALA G Protein S 5 FT #SUB 60 571 TRP B 43 73 ALA G Protein S 1 FT #SUB 60 571 TRP B 44 74 CYS G Protein S 5 FT #SUB 60 571 TRP B 77 107 ASP G Protein S 3 FT #SUB 60 571 TRP B 81 111 LEU G Protein S 2 FT #SUB 60 571 TRP B 187 217 TYR G Protein S 1 FT #SUB 63 574 LYS B 21 51 THR G Protein B 1 FT #SUB 63 574 LYS B 22 52 LEU G Protein S 5 FT #SUB 63 574 LYS B 73 103 GLN G Protein S 2 FT #SUB 63 574 LYS B 77 107 ASP G Protein S 7 FT #SUB 64 575 GLN B 23 53 PHE G Protein B 1 FT #SUB 67 578 ALA B 21 51 THR G Protein B 1 FT #SUB 67 578 ALA B 190 220 PRO G Protein A 3 FT #SUB 70 581 LEU B 20 50 THR G Protein S 1 FT #SUB 70 581 LEU B 193 223 PHE G Protein S 3 FT #SUB 71 582 ALA B 191 221 ALA G Protein A 3 FT #SUB 74 585 ARG B 192 222 GLY G Protein S 1 FT #SUB 74 585 ARG B 458 490 LYS G Protein S 2 FT #SUB 74 585 ARG B 459 491 ILE G Protein S 5 FT #SUB 75 586 TYR B 10 40 TYR G Protein S 2 FT #SUB 78 589 ASP B 10 40 TYR G Protein S 1 FT #SUB 78 589 ASP B 461 493 PRO G Protein S 2 FT #SUB 78 589 ASP B 462 494 LEU G Protein S 1 FT #SUB 79 590 GLN B 10 40 TYR G Protein S 4 FT #SUB 82 593 LEU B 8 38 VAL G Protein S 1 FT #SUB 82 593 LEU B 10 40 TYR G Protein S 3 FT #SUB 82 593 LEU B 462 494 LEU G Protein S 1 FT #SUB 85 596 TRP B 8 38 VAL G Protein S 3 FT #SUB 85 596 TRP B 471 503 ARG G Protein B 3 FT #SUB 86 597 GLY B 471 503 ARG G Protein B 1 FT #SUB 87 598 CYS B 471 503 ARG G Protein S 1 FT #SUB 91 602 LEU B 8 38 VAL G Protein B 1 FT #SUB 91 602 LEU B 9 39 TYR G Protein B 2 FT #SUB 91 602 LEU B 10 40 TYR G Protein A 3 FT #SUB 92 603 ILE B 8 38 VAL G Protein B 2 FT #SUB 92 603 ILE B 9 39 TYR G Protein S 5 FT #SUB 93 604 CYS B 7 37 THR G Protein B 3 FT #SUB 93 604 CYS B 8 38 VAL G Protein A 4 FT #SUB 94 605 CYS B 469 501 CYS G Protein A 6 FT #SUB 94 605 CYS B 470 502 LYS G Protein S 2 FT #SUB 94 605 CYS B 471 503 ARG G Protein A 7 FT #SUB 95 606 THR B 6 36 VAL G Protein A 9 FT #SUB 95 606 THR B 470 502 LYS G Protein B 4 FT #SUB 95 606 THR B 471 503 ARG G Protein B 5 FT #SUB 96 607 ASN B 5 35 TRP G Protein B 3 FT #SUB 96 607 ASN B 470 502 LYS G Protein S 3 FT #SUB 96 607 ASN B 471 503 ARG G Protein S 5 FT #SUB 97 608 VAL B 5 35 TRP G Protein B 5 FT #SUB 97 608 VAL B 6 36 VAL G Protein A 3 FT #SUB 98 609 PRO B 4 34 LEU G Protein B 2 FT #SUB 98 609 PRO B 5 35 TRP G Protein A 4 FT #SUB 99 610 TRP B 4 34 LEU G Protein A 6 FT #SUB 99 610 TRP B 6 36 VAL G Protein S 2 FT #SUB 99 610 TRP B 465 497 ALA G Protein S 2 FT #SUB 99 610 TRP B 466 498 PRO G Protein S 16 FT #SUB 103 614 TRP B 6 36 VAL G Protein S 1 FT #SUB 108 619 LEU B 4 34 LEU G Protein S 4 FT #SUB 108 619 LEU B 466 498 PRO G Protein S 1 FT #SUB 108 619 LEU B 468 500 ARG G Protein S 3 FT #SUB 111 622 ILE B 466 498 PRO G Protein S 1 FT #SUB 112 623 TRP B 9 39 TYR G Protein S 4 FT #SUB 112 623 TRP B 465 497 ALA G Protein S 2 FT #SUB 112 623 TRP B 466 498 PRO G Protein S 3 FT #SUB 112 623 TRP B 467 499 THR G Protein S 1 FT #SUB 117 628 TRP B 9 39 TYR G Protein S 5 FT #SUB 117 628 TRP B 12 42 VAL G Protein S 8 FT #SUB 117 628 TRP B 463 495 GLY G Protein S 2 FT #SUB 118 629 LEU B 13 43 PRO G Protein S 1 FT #SUB 118 629 LEU B 14 44 VAL G Protein S 2 FT #SUB 118 629 LEU B 15 45 TRP G Protein S 4 FT #SUB 120 631 TRP B 464 496 VAL G Protein S 5 FT #SUB 120 631 TRP B 466 498 PRO G Protein S 2 FT #SUB 121 632 ASP B 14 44 VAL G Protein S 1 FT #SUB 121 632 ASP B 16 46 LYS G Protein S 3 FT #SUB 124 635 ILE B 464 496 VAL G Protein S 1 FT #SUB 131 642 ILE B 6 36 VAL G Protein S 2 FT #SUB 135 646 LEU B 8 38 VAL G Protein S 1 FT #SUB 139 650 GLN B 471 503 ARG G Protein S 2 FT #SUB 142 653 GLN B 471 503 ARG G Protein S 3 FT #HET 9 520 LEU B 3 1 NAG C S 1 FT #HET 16 527 GLY B 3 1 NAG C B 1 FT #HET 17 528 SER B 3 1 NAG C A 6 FT #HET 102 613 SER B 31 701 NAG B S 1 FT #HET 106 617 ARG B 32 702 NAG B S 10 FT #HET 110 621 GLU B 32 702 NAG B S 5 FT #HET 115 626 MET B 32 702 NAG B S 1 FT #HET 119 630 GLN B 32 702 NAG B S 1 FT #MOD 100 611 ASN B 31 701 NAG B S FT #MOD 114 625 ASN B 32 702 NAG B S FT DISORDER 1 7 FT DISORDER 39 55 FT DISORDER 153 153 CC SEQUENCE 128 AA (ATOM); CC FLGFLGAAGS TMGAASMTLT VQARNLLSGI VKLTVWGIKQ LQARVLAVER YLRDQQLLGI CC WGCSGKLICC TNVPWNSSWS NRNLSEIWDN MTWLQWDKEI SNYTQIIYGL LEESQNQQEK CC NEQDLLAL CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEA CC ATOM -------FLGFLGAAGSTMGAASMTLTVQARNLLSGIV------------ CC ******************************* CC SEQRES QQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWN CC ATOM -----KLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWN CC ********************************************* CC SEQRES SSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLL CC ATOM SSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLL CC ************************************************** CC SEQRES ALD CC ATOM AL- CC ** SQ SEQUENCE 153 AA; MW; CN; AVGIGAVFLG FLGAAGSTMG AASMTLTVQA RNLLSGIVQQ QSNLLRAPEA QQHLLKLTVW GIKQLQARVL AVERYLRDQQ LLGIWGCSGK LICCTNVPWN SSWSNRNLSE IWDNMTWLQW DKEISNYTQI IYGLLEESQN QQEKNEQDLL ALD // ID 6MTND STANDARD; PRT; 134 AA. DT CONVERTED FROM PDB (SEQRES) 6MTN DE 35O22 scFv heavy chain portion OS Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.500 CC R-Factor 0.225 FT #SUB 32 32 TYR D 114 625 ASN B Protein S 4 FT #SUB 81 72H PHE D 119 630 GLN B Protein S 7 FT #SUB 109 97 LEU D 109 620 SER B Protein S 3 FT #SUB 109 97 LEU D 113 624 ASP B Protein S 1 FT #SUB 109 97 LEU D 114 625 ASN B Protein S 1 FT #SUB 110 98 ARG D 16 527 GLY B Protein S 3 FT #SUB 110 98 ARG D 18 529 THR B Protein S 2 FT #SUB 110 98 ARG D 113 624 ASP B Protein A 3 FT #SUB 110 98 ARG D 114 625 ASN B Protein S 4 FT #SUB 110 98 ARG D 116 627 THR B Protein S 1 FT #SUB 111 99 ASP D 113 624 ASP B Protein A 11 FT #SUB 112 100 GLY D 113 624 ASP B Protein B 2 FT #SUB 37 37 ILE D 102 98 PHE E Protein S 2 FT #SUB 39 39 GLN D 41 38 TRP E Protein S 5 FT #SUB 39 39 GLN D 44 41 GLY E Protein S 4 FT #SUB 45 45 PRO D 41 38 TRP E Protein S 4 FT #SUB 45 45 PRO D 90 87 TYR E Protein S 4 FT #SUB 45 45 PRO D 102 98 PHE E Protein B 3 FT #SUB 47 47 TRP D 99 95A GLY E Protein S 6 FT #SUB 47 47 TRP D 100 96 CYS E Protein S 3 FT #SUB 47 47 TRP D 102 98 PHE E Protein S 1 FT #SUB 50 50 TRP D 98 95 SER E Protein S 3 FT #SUB 59 58 ASN D 98 95 SER E Protein S 1 FT #SUB 103 91 PHE D 45 42 ARG E Protein S 5 FT #SUB 108 96 LEU D 52 49 TYR E Protein S 4 FT #SUB 113 100A SER D 94 91 TYR E Protein B 1 FT #SUB 113 100A SER D 96 93 HIS E Protein B 1 FT #SUB 114 100B SER D 52 49 TYR E Protein S 2 FT #SUB 114 100B SER D 53 50 GLU E Protein S 3 FT #SUB 114 100B SER D 94 91 TYR E Protein S 4 FT #SUB 116 100D TRP D 94 91 TYR E Protein S 5 FT #SUB 116 100D TRP D 95 92 THR E Protein S 3 FT #SUB 116 100D TRP D 96 93 HIS E Protein S 4 FT #SUB 116 100D TRP D 98 95 SER E Protein S 6 FT #SUB 116 100D TRP D 99 95A GLY E Protein S 6 FT #SUB 116 100D TRP D 100 96 CYS E Protein S 2 FT #SUB 117 100E LEU D 37 34 SER E Protein S 1 FT #SUB 117 100E LEU D 39 36 TYR E Protein S 2 FT #SUB 117 100E LEU D 49 46 LEU E Protein S 1 FT #SUB 117 100E LEU D 52 49 TYR E Protein S 1 FT #SUB 117 100E LEU D 94 91 TYR E Protein S 5 FT #SUB 117 100E LEU D 100 96 CYS E Protein S 1 FT #SUB 118 100F PRO D 39 36 TYR E Protein A 8 FT #SUB 119 101 TYR D 59 56 PRO E Protein S 2 FT #SUB 121 103 TRP D 39 36 TYR E Protein S 1 FT #SUB 121 103 TRP D 47 44 PRO E Protein S 6 FT #SUB 122 104 GLY D 46 43 ALA E Protein B 1 FT #SUB 28 28 ARG D 58 88 ASN G Protein S 3 FT #SUB 28 28 ARG D 60 90 THR G Protein S 2 FT #SUB 31 31 PHE D 58 88 ASN G Protein S 4 FT #SUB 54 53 TYR D 57 87 GLU G Protein S 3 FT #SUB 54 53 TYR D 58 88 ASN G Protein S 2 FT #SUB 77 72D PRO D 208 238 PRO G Protein S 1 FT #SUB 77 72D PRO D 210 240 PRO G Protein S 1 FT #SUB 78 72E VAL D 208 238 PRO G Protein B 2 FT #SUB 79 72F THR D 60 90 THR G Protein B 1 FT #SUB 79 72F THR D 62 92 GLU G Protein A 3 FT #SUB 80 72G SER D 60 90 THR G Protein A 6 FT #SUB 80 72G SER D 62 92 GLU G Protein B 1 FT #SUB 110 98 ARG D 58 88 ASN G Protein S 2 FT #HET 1 1 GLN D 32 702 NAG B B 1 FT #HET 30 30 ASN D 3 1 NAG C B 2 FT #HET 31 31 PHE D 3 1 NAG C A 8 FT #HET 31 31 PHE D 4 2 NAG C B 2 FT #HET 32 32 TYR D 32 702 NAG B S 1 FT #HET 33 33 HIS D 4 2 NAG C A 12 FT #HET 50 50 TRP D 6 4 MAN C S 3 FT #HET 52 52 SER D 4 2 NAG C S 2 FT #HET 54 53 TYR D 3 1 NAG C S 11 FT #HET 55 54 SER D 7 5 MAN C S 2 FT #HET 57 56 ASP D 6 4 MAN C S 6 FT #HET 57 56 ASP D 7 5 MAN C S 10 FT #HET 90 81 GLU D 1 1 NAG A S 1 FT #HET 108 96 LEU D 32 702 NAG B A 2 FT #HET 109 97 LEU D 32 702 NAG B S 1 FT #HET 110 98 ARG D 3 1 NAG C S 6 FT #HET 110 98 ARG D 4 2 NAG C B 3 FT #HET 111 99 ASP D 4 2 NAG C S 1 FT #HET 111 99 ASP D 8 6 MAN C S 6 FT #HET 112 100 GLY D 5 3 BMA C B 4 FT #HET 112 100 GLY D 8 6 MAN C B 6 FT #HET 113 100A SER D 8 6 MAN C A 3 FT #HET 115 100C THR D 4 2 NAG C S 4 FT #HET 115 100C THR D 5 3 BMA C S 3 FT #MOD 69 68 ASN D 1 1 NAG A S FT DISORDER 129 134 CC SEQUENCE 128 AA (ATOM); CC QGQLVQSGAT TTKPGSSVKI SCKTSGYRFN FYHINWIRQT AGRGPEWMGW ISPYSGDKNL CC APAFQDRVNM TTDTEVPVTS FTSTGAAYME IRNLTSDDTG TYFCAKGLLR DGSSTWLPYL CC WGQGTLLT CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGW CC ATOM QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGW CC ************************************************** CC SEQRES ISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTG CC ATOM ISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTG CC ************************************************** CC SEQRES TYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSAST CC ATOM TYFCAKGLLRDGSSTWLPYLWGQGTLLT------ CC **************************** SQ SEQUENCE 134 AA; MW; CN; QGQLVQSGAT TTKPGSSVKI SCKTSGYRFN FYHINWIRQT AGRGPEWMGW ISPYSGDKNL APAFQDRVNM TTDTEVPVTS FTSTGAAYME IRNLTSDDTG TYFCAKGLLR DGSSTWLPYL WGQGTLLTVS SAST // ID 6MTNE STANDARD; PRT; 114 AA. DT CONVERTED FROM PDB (SEQRES) 6MTN DE 35O22 scFv light chain portion OS Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.500 CC R-Factor 0.225 FT #SUB 52 49 TYR E 109 620 SER B Protein S 1 FT #SUB 59 56 PRO E 110 621 GLU B Protein S 2 FT #SUB 37 34 SER E 117 100E LEU D Protein S 1 FT #SUB 39 36 TYR E 117 100E LEU D Protein S 2 FT #SUB 39 36 TYR E 118 100F PRO D Protein S 8 FT #SUB 39 36 TYR E 121 103 TRP D Protein S 1 FT #SUB 41 38 TRP E 39 39 GLN D Protein S 5 FT #SUB 41 38 TRP E 45 45 PRO D Protein S 4 FT #SUB 44 41 GLY E 39 39 GLN D Protein B 4 FT #SUB 45 42 ARG E 103 91 PHE D Protein B 5 FT #SUB 46 43 ALA E 122 104 GLY D Protein S 1 FT #SUB 47 44 PRO E 121 103 TRP D Protein S 6 FT #SUB 49 46 LEU E 117 100E LEU D Protein S 1 FT #SUB 52 49 TYR E 108 96 LEU D Protein S 4 FT #SUB 52 49 TYR E 114 100B SER D Protein S 2 FT #SUB 52 49 TYR E 117 100E LEU D Protein S 1 FT #SUB 53 50 GLU E 114 100B SER D Protein S 3 FT #SUB 59 56 PRO E 119 101 TYR D Protein S 2 FT #SUB 90 87 TYR E 45 45 PRO D Protein S 4 FT #SUB 94 91 TYR E 113 100A SER D Protein S 1 FT #SUB 94 91 TYR E 114 100B SER D Protein S 4 FT #SUB 94 91 TYR E 116 100D TRP D Protein S 5 FT #SUB 94 91 TYR E 117 100E LEU D Protein S 5 FT #SUB 95 92 THR E 116 100D TRP D Protein B 3 FT #SUB 96 93 HIS E 113 100A SER D Protein B 1 FT #SUB 96 93 HIS E 116 100D TRP D Protein B 4 FT #SUB 98 95 SER E 50 50 TRP D Protein B 3 FT #SUB 98 95 SER E 59 58 ASN D Protein B 1 FT #SUB 98 95 SER E 116 100D TRP D Protein B 6 FT #SUB 99 95A GLY E 47 47 TRP D Protein B 6 FT #SUB 99 95A GLY E 116 100D TRP D Protein B 6 FT #SUB 100 96 CYS E 47 47 TRP D Protein B 3 FT #SUB 100 96 CYS E 116 100D TRP D Protein B 2 FT #SUB 100 96 CYS E 117 100E LEU D Protein S 1 FT #SUB 102 98 PHE E 37 37 ILE D Protein S 2 FT #SUB 102 98 PHE E 45 45 PRO D Protein S 3 FT #SUB 102 98 PHE E 47 47 TRP D Protein S 1 FT #HET 59 56 PRO E 32 702 NAG B S 1 FT #HET 96 93 HIS E 5 3 BMA C S 5 FT #HET 96 93 HIS E 8 6 MAN C S 2 FT #HET 97 94 ASN E 6 4 MAN C A 3 FT DISORDER 1 3 FT DISORDER 109 114 CC SEQUENCE 105 AA (ATOM); CC VLTQSASVSG SLGQSVTISC TGPNSVCCSH KSISWYQWPP GRAPTLIIYE DNERAPGISP CC RFSGYKSYWS AYLTISDLRP EDETTYYCCS YTHNSGCVFG TGTKV CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLI CC ATOM ---VLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLI CC *********************************************** CC SEQRES IYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGC CC ATOM IYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGC CC ************************************************** CC SEQRES VFGTGTKVSVLGQS CC ATOM VFGTGTKV------ CC ******** SQ SEQUENCE 114 AA; MW; CN; SQSVLTQSAS VSGSLGQSVT ISCTGPNSVC CSHKSISWYQ WPPGRAPTLI IYEDNERAPG ISPRFSGYKS YWSAYLTISD LRPEDETTYY CCSYTHNSGC VFGTGTKVSV LGQS // ID 6MTNG STANDARD; PRT; 481 AA. DT CONVERTED FROM PDB (SEQRES) 6MTN DE Envelope glycoprotein gp160 OS Human immunodeficiency virus 1 CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.500 CC R-Factor 0.225 FT #SUB 4 34 LEU G 98 609 PRO B Protein B 2 FT #SUB 4 34 LEU G 99 610 TRP B Protein A 6 FT #SUB 4 34 LEU G 108 619 LEU B Protein S 4 FT #SUB 5 35 TRP G 96 607 ASN B Protein S 3 FT #SUB 5 35 TRP G 97 608 VAL B Protein A 5 FT #SUB 5 35 TRP G 98 609 PRO B Protein S 4 FT #SUB 6 36 VAL G 95 606 THR B Protein A 9 FT #SUB 6 36 VAL G 97 608 VAL B Protein A 3 FT #SUB 6 36 VAL G 99 610 TRP B Protein S 2 FT #SUB 6 36 VAL G 103 614 TRP B Protein S 1 FT #SUB 6 36 VAL G 131 642 ILE B Protein S 2 FT #SUB 7 37 THR G 93 604 CYS B Protein A 3 FT #SUB 8 38 VAL G 82 593 LEU B Protein S 1 FT #SUB 8 38 VAL G 85 596 TRP B Protein S 3 FT #SUB 8 38 VAL G 91 602 LEU B Protein B 1 FT #SUB 8 38 VAL G 92 603 ILE B Protein B 2 FT #SUB 8 38 VAL G 93 604 CYS B Protein A 4 FT #SUB 8 38 VAL G 135 646 LEU B Protein S 1 FT #SUB 9 39 TYR G 23 534 SER B Protein S 2 FT #SUB 9 39 TYR G 91 602 LEU B Protein B 2 FT #SUB 9 39 TYR G 92 603 ILE B Protein S 5 FT #SUB 9 39 TYR G 112 623 TRP B Protein S 4 FT #SUB 9 39 TYR G 117 628 TRP B Protein S 5 FT #SUB 10 40 TYR G 26 537 LEU B Protein B 1 FT #SUB 10 40 TYR G 33 544 LEU B Protein S 3 FT #SUB 10 40 TYR G 75 586 TYR B Protein S 2 FT #SUB 10 40 TYR G 78 589 ASP B Protein S 1 FT #SUB 10 40 TYR G 79 590 GLN B Protein S 4 FT #SUB 10 40 TYR G 82 593 LEU B Protein S 3 FT #SUB 10 40 TYR G 91 602 LEU B Protein B 3 FT #SUB 11 41 GLY G 26 537 LEU B Protein B 3 FT #SUB 11 41 GLY G 29 540 GLN B Protein B 3 FT #SUB 12 42 VAL G 117 628 TRP B Protein S 8 FT #SUB 13 43 PRO G 12 523 LEU B Protein A 2 FT #SUB 13 43 PRO G 15 526 ALA B Protein S 1 FT #SUB 13 43 PRO G 22 533 ALA B Protein S 2 FT #SUB 13 43 PRO G 29 540 GLN B Protein S 2 FT #SUB 13 43 PRO G 118 629 LEU B Protein B 1 FT #SUB 14 44 VAL G 118 629 LEU B Protein A 2 FT #SUB 14 44 VAL G 121 632 ASP B Protein S 1 FT #SUB 15 45 TRP G 12 523 LEU B Protein S 2 FT #SUB 15 45 TRP G 15 526 ALA B Protein S 2 FT #SUB 15 45 TRP G 118 629 LEU B Protein A 4 FT #SUB 16 46 LYS G 121 632 ASP B Protein S 3 FT #SUB 20 50 THR G 70 581 LEU B Protein S 1 FT #SUB 21 51 THR G 63 574 LYS B Protein S 1 FT #SUB 21 51 THR G 67 578 ALA B Protein S 1 FT #SUB 22 52 LEU G 63 574 LYS B Protein B 5 FT #SUB 23 53 PHE G 37 548 ILE B Protein S 2 FT #SUB 23 53 PHE G 38 549 VAL B Protein S 4 FT #SUB 23 53 PHE G 64 575 GLN B Protein S 1 FT #SUB 24 54 CYS G 60 571 TRP B Protein S 7 FT #SUB 39 69 TRP G 60 571 TRP B Protein B 3 FT #SUB 40 70 ALA G 60 571 TRP B Protein A 5 FT #SUB 43 73 ALA G 58 569 THR B Protein S 1 FT #SUB 43 73 ALA G 60 571 TRP B Protein B 1 FT #SUB 44 74 CYS G 60 571 TRP B Protein S 5 FT #SUB 45 75 VAL G 37 548 ILE B Protein S 1 FT #SUB 46 76 PRO G 37 548 ILE B Protein B 1 FT #SUB 54 84 ILE G 9 520 LEU B Protein S 1 FT #SUB 54 84 ILE G 11 522 PHE B Protein S 4 FT #SUB 56 86 LEU G 12 523 LEU B Protein S 2 FT #SUB 57 87 GLU G 16 527 GLY B Protein B 2 FT #SUB 58 88 ASN G 16 527 GLY B Protein S 1 FT #SUB 59 89 VAL G 15 526 ALA B Protein S 2 FT #SUB 59 89 VAL G 16 527 GLY B Protein S 2 FT #SUB 73 103 GLN G 63 574 LYS B Protein S 2 FT #SUB 77 107 ASP G 60 571 TRP B Protein S 3 FT #SUB 77 107 ASP G 63 574 LYS B Protein S 7 FT #SUB 80 110 SER G 59 570 VAL B Protein S 1 FT #SUB 81 111 LEU G 59 570 VAL B Protein S 2 FT #SUB 81 111 LEU G 60 571 TRP B Protein S 2 FT #SUB 84 114 GLN G 58 569 THR B Protein S 6 FT #SUB 84 114 GLN G 59 570 VAL B Protein S 3 FT #SUB 187 217 TYR G 60 571 TRP B Protein S 1 FT #SUB 190 220 PRO G 38 549 VAL B Protein B 2 FT #SUB 190 220 PRO G 67 578 ALA B Protein S 3 FT #SUB 191 221 ALA G 33 544 LEU B Protein S 1 FT #SUB 191 221 ALA G 34 545 LEU B Protein S 3 FT #SUB 191 221 ALA G 35 546 SER B Protein S 2 FT #SUB 191 221 ALA G 38 549 VAL B Protein B 1 FT #SUB 191 221 ALA G 71 582 ALA B Protein A 3 FT #SUB 192 222 GLY G 33 544 LEU B Protein B 1 FT #SUB 192 222 GLY G 74 585 ARG B Protein B 1 FT #SUB 193 223 PHE G 70 581 LEU B Protein S 3 FT #SUB 214 244 THR G 11 522 PHE B Protein S 1 FT #SUB 458 490 LYS G 74 585 ARG B Protein S 2 FT #SUB 459 491 ILE G 12 523 LEU B Protein S 1 FT #SUB 459 491 ILE G 74 585 ARG B Protein B 5 FT #SUB 461 493 PRO G 33 544 LEU B Protein S 2 FT #SUB 461 493 PRO G 78 589 ASP B Protein S 2 FT #SUB 462 494 LEU G 78 589 ASP B Protein S 1 FT #SUB 462 494 LEU G 82 593 LEU B Protein S 1 FT #SUB 463 495 GLY G 117 628 TRP B Protein B 2 FT #SUB 464 496 VAL G 120 631 TRP B Protein B 5 FT #SUB 464 496 VAL G 124 635 ILE B Protein B 1 FT #SUB 465 497 ALA G 19 530 MET B Protein S 1 FT #SUB 465 497 ALA G 99 610 TRP B Protein B 2 FT #SUB 465 497 ALA G 112 623 TRP B Protein S 2 FT #SUB 466 498 PRO G 99 610 TRP B Protein A 16 FT #SUB 466 498 PRO G 108 619 LEU B Protein B 1 FT #SUB 466 498 PRO G 111 622 ILE B Protein S 1 FT #SUB 466 498 PRO G 112 623 TRP B Protein B 3 FT #SUB 466 498 PRO G 120 631 TRP B Protein S 2 FT #SUB 467 499 THR G 112 623 TRP B Protein S 1 FT #SUB 468 500 ARG G 108 619 LEU B Protein S 3 FT #SUB 469 501 CYS G 94 605 CYS B Protein A 6 FT #SUB 470 502 LYS G 94 605 CYS B Protein B 2 FT #SUB 470 502 LYS G 95 606 THR B Protein A 4 FT #SUB 470 502 LYS G 96 607 ASN B Protein S 3 FT #SUB 471 503 ARG G 85 596 TRP B Protein S 3 FT #SUB 471 503 ARG G 86 597 GLY B Protein S 1 FT #SUB 471 503 ARG G 87 598 CYS B Protein S 1 FT #SUB 471 503 ARG G 94 605 CYS B Protein A 7 FT #SUB 471 503 ARG G 95 606 THR B Protein A 5 FT #SUB 471 503 ARG G 96 607 ASN B Protein A 5 FT #SUB 471 503 ARG G 139 650 GLN B Protein S 2 FT #SUB 471 503 ARG G 142 653 GLN B Protein S 3 FT #SUB 57 87 GLU G 54 53 TYR D Protein S 3 FT #SUB 58 88 ASN G 28 28 ARG D Protein B 3 FT #SUB 58 88 ASN G 31 31 PHE D Protein A 4 FT #SUB 58 88 ASN G 54 53 TYR D Protein S 2 FT #SUB 58 88 ASN G 110 98 ARG D Protein S 2 FT #SUB 60 90 THR G 28 28 ARG D Protein S 2 FT #SUB 60 90 THR G 79 72F THR D Protein S 1 FT #SUB 60 90 THR G 80 72G SER D Protein A 6 FT #SUB 62 92 GLU G 79 72F THR D Protein S 3 FT #SUB 62 92 GLU G 80 72G SER D Protein S 1 FT #SUB 208 238 PRO G 77 72D PRO D Protein S 1 FT #SUB 208 238 PRO G 78 72E VAL D Protein S 2 FT #SUB 210 240 PRO G 77 72D PRO D Protein S 1 FT #SUB 108 138 ILE G 105 100B TYR H Protein S 1 FT #SUB 294 325 ASP G 105 100B TYR H Protein S 3 FT #SUB 296 327 ARG G 106 100C GLY H Protein S 4 FT #SUB 296 327 ARG G 112 100I GLU H Protein A 12 FT #SUB 297 328 GLN G 110 100G PHE H Protein S 3 FT #SUB 297 328 GLN G 112 100I GLU H Protein A 5 FT #SUB 299 330 HIS G 107 100D MET H Protein S 2 FT #SUB 383 415 THR G 107 100D MET H Protein S 1 FT #SUB 385 417 PRO G 110 100G PHE H Protein S 1 FT #SUB 105 135 THR G 95 94 ARG L Protein S 9 FT #SUB 106 136 ASN G 95 94 ARG L Protein B 1 FT #SUB 107 137 ALA G 96 95 SER L Protein S 1 FT #SUB 107 137 ALA G 97 95A GLY L Protein S 1 FT #SUB 290 321A ASP G 95 94 ARG L Protein S 1 FT #SUB 291 322 ILE G 95 94 ARG L Protein B 4 FT #SUB 292 323 ILE G 68 67C PHE L Protein S 1 FT #SUB 293 324 GLY G 26 28 LEU L Protein B 4 FT #SUB 293 324 GLY G 27 29 GLY L Protein B 1 FT #SUB 293 324 GLY G 68 67C PHE L Protein B 4 FT #SUB 293 324 GLY G 95 94 ARG L Protein B 3 FT #SUB 294 325 ASP G 27 29 GLY L Protein S 2 FT #SUB 294 325 ASP G 28 30 SER L Protein S 10 FT #SUB 294 325 ASP G 94 93 SER L Protein S 2 FT #SUB 295 326 ILE G 95 94 ARG L Protein S 3 FT #HET 57 87 GLU G 3 1 NAG C S 3 FT #HET 79 109 ILE G 42 638 JYJ G S 1 FT #HET 82 112 TRP G 42 638 JYJ G S 9 FT #HET 83 113 ASP G 42 638 JYJ G S 3 FT #HET 86 116 LEU G 42 638 JYJ G S 1 FT #HET 100 130 GLN G 34 611 NAG G S 3 FT #HET 101 131 CYS G 33 607 NAG G B 1 FT #HET 102 132 THR G 33 607 NAG G B 1 FT #HET 104 134 VAL G 9 1 NAG F S 2 FT #HET 110 140 ASP G 33 607 NAG G B 2 FT #HET 111 141 ASP G 33 607 NAG G S 1 FT #HET 113 151 ARG G 33 607 NAG G S 2 FT #HET 120 158 SER G 9 1 NAG F S 1 FT #HET 120 158 SER G 34 611 NAG G B 2 FT #HET 121 159 PHE G 34 611 NAG G B 2 FT #HET 135 173 TYR G 9 1 NAG F S 3 FT #HET 135 173 TYR G 10 2 NAG F S 2 FT #HET 137 175 LEU G 9 1 NAG F S 1 FT #HET 162 192 ARG G 35 612 NAG G S 2 FT #HET 181 211 GLU G 13 2 NAG I S 5 FT #HET 206 236 THR G 36 613 NAG G S 1 FT #HET 225 255 VAL G 42 638 JYJ G A 7 FT #HET 231 261 LEU G 12 1 NAG I S 1 FT #HET 232 262 ASN G 29 1 NAG N S 3 FT #HET 235 265 LEU G 29 1 NAG N S 1 FT #HET 244 274 SER G 36 613 NAG G B 1 FT #HET 245 275 GLU G 36 613 NAG G B 1 FT #HET 248 278 THR G 37 617 NAG G S 2 FT #HET 249 279 ASN G 37 617 NAG G A 5 FT #HET 261 291 PRO G 29 1 NAG N S 5 FT #HET 263 293 GLN G 15 1 NAG J S 2 FT #HET 267 297 THR G 19 1 NAG M S 1 FT #HET 290 321A ASP G 9 1 NAG F S 3 FT #HET 292 323 ILE G 17 1 NAG K S 5 FT #HET 296 327 ARG G 20 2 NAG M S 3 FT #HET 299 330 HIS G 19 1 NAG M S 3 FT #HET 303 334 SER G 15 1 NAG J B 1 FT #HET 333 364 SER G 39 633 NAG G B 1 FT #HET 344 375 SER G 42 638 JYJ G A 5 FT #HET 345 376 PHE G 42 638 JYJ G B 3 FT #HET 346 377 ASN G 12 1 NAG I B 1 FT #HET 348 379 GLY G 13 2 NAG I B 2 FT #HET 351 382 PHE G 42 638 JYJ G S 5 FT #HET 353 384 TYR G 42 638 JYJ G S 1 FT #HET 355 386 ASN G 39 633 NAG G S 2 FT #HET 357 388 SER G 39 633 NAG G S 3 FT #HET 357 388 SER G 40 634 NAG G S 4 FT #HET 358 389 GLY G 41 635 NAG G B 3 FT #HET 392 424 ILE G 42 638 JYJ G A 2 FT #HET 393 425 ASN G 42 638 JYJ G B 4 FT #HET 394 426 MET G 42 638 JYJ G A 13 FT #HET 395 427 TRP G 42 638 JYJ G A 14 FT #HET 400 432 GLN G 42 638 JYJ G B 2 FT #HET 401 433 ALA G 42 638 JYJ G B 3 FT #HET 402 434 MET G 42 638 JYJ G B 1 FT #HET 410 442 VAL G 17 1 NAG K S 1 FT #HET 412 444 ARG G 13 2 NAG I B 1 FT #HET 412 444 ARG G 15 1 NAG J S 6 FT #HET 412 444 ARG G 19 1 NAG M S 1 FT #HET 413 445 CYS G 12 1 NAG I S 1 FT #HET 413 445 CYS G 13 2 NAG I A 2 FT #HET 414 446 VAL G 12 1 NAG I B 2 FT #HET 415 447 SER G 12 1 NAG I S 4 FT #HET 443 475 MET G 42 638 JYJ G S 5 FT #MOD 58 88 ASN G 3 1 NAG C S FT #MOD 103 133 ASN G 33 607 NAG G S FT #MOD 118 156 ASN G 9 1 NAG F S FT #MOD 122 160 ASN G 34 611 NAG G S FT #MOD 167 197 ASN G 35 612 NAG G S FT #MOD 204 234 ASN G 36 613 NAG G S FT #MOD 232 262 ASN G 12 1 NAG I S FT #MOD 246 276 ASN G 37 617 NAG G S FT #MOD 265 295 ASN G 15 1 NAG J S FT #MOD 271 301 ASN G 17 1 NAG K S FT #MOD 301 332 ASN G 19 1 NAG M S FT #MOD 324 355 ASN G 38 632 NAG G S FT #MOD 332 363 ASN G 39 633 NAG G S FT #MOD 355 386 ASN G 40 634 NAG G S FT #MOD 361 392 ASN G 41 635 NAG G S FT #MOD 416 448 ASN G 29 1 NAG N S FT DISORDER 1 1 FT DISORDER 31 34 FT DISORDER 148 157 FT DISORDER 368 379 FT DISORDER 427 432 FT DISORDER 473 481 CC SEQUENCE 439 AA (ATOM); CC ENLWVTVYYG VPVWKDAETT LFCASDAKAK HNVWATHACV PTDPNPQEIH LENVTEEFNM CC WKNNMVEQMH TDIISLWDQS LKPCVKLTPL CVTLQCTNVT NAITDDMRGE LKNCSFNMTT CC ELRDKKQKVY SLFYRLDVVQ INNKEYRLIN CNTSAITQAC PKVSFEPIPI HYCAPAGFAI CC LKCKDKKFNG TGPCPSVSTV QCTHGIKPVV STQLLLNGSL AEEEVMIRSE NITNNAKNIL CC VQFNTPVQIN CTRPNNNTRK SIRIGPGQAF YATGDIIGDI RQAHCNVSKA TWNETLGKVV CC KQLRKHFGNN TIIRFANSSG GDLEVTTHSF NCGGEFFYCN TSGLFNSTWI SNDSITLPCR CC IKQIINMWQR IGQAMYAPPI QGVIRCVSNI TGLILTRDGT ETFRPGGGDM RDNWRSELYK CC YKVVKIEPLG VAPTRCKRR CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPN CC ATOM -ENLWVTVYYGVPVWKDAETTLFCASDAKA----KHNVWATHACVPTDPN CC ***************************** **************** CC SEQRES PQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQ CC ATOM PQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQ CC ************************************************** CC SEQRES CTNVTNAITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQ CC ATOM CTNVTNAITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQIN--- CC *********************************************** CC SEQRES GNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKD CC ATOM -------NKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKD CC ******************************************* CC SEQRES KKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNN CC ATOM KKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNN CC ************************************************** CC SEQRES AKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHC CC ATOM AKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHC CC ************************************************** CC SEQRES NVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGE CC ATOM NVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGE CC ************************************************** CC SEQRES FFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQ CC ATOM FFYCNTSGLFNSTWISN------------DSITLPCRIKQIINMWQRIGQ CC ***************** ********************* CC SEQRES AMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSE CC ATOM AMYAPPIQGVIRCVSNITGLILTRDG------TETFRPGGGDMRDNWRSE CC ************************** ****************** CC SEQRES LYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR CC ATOM LYKYKVVKIEPLGVAPTRCKRR--------- CC ********************** SQ SEQUENCE 481 AA; MW; CN; AENLWVTVYY GVPVWKDAET TLFCASDAKA YETEKHNVWA THACVPTDPN PQEIHLENVT EEFNMWKNNM VEQMHTDIIS LWDQSLKPCV KLTPLCVTLQ CTNVTNAITD DMRGELKNCS FNMTTELRDK KQKVYSLFYR LDVVQINENQ GNRSNNSNKE YRLINCNTSA ITQACPKVSF EPIPIHYCAP AGFAILKCKD KKFNGTGPCP SVSTVQCTHG IKPVVSTQLL LNGSLAEEEV MIRSENITNN AKNILVQFNT PVQINCTRPN NNTRKSIRIG PGQAFYATGD IIGDIRQAHC NVSKATWNET LGKVVKQLRK HFGNNTIIRF ANSSGGDLEV TTHSFNCGGE FFYCNTSGLF NSTWISNTSV QGSNSTGSND SITLPCRIKQ IINMWQRIGQ AMYAPPIQGV IRCVSNITGL ILTRDGGSTN STTETFRPGG GDMRDNWRSE LYKYKVVKIE PLGVAPTRCK RRVVGRRRRR R // ID 6MTNH STANDARD; PRT; 244 AA. DT CONVERTED FROM PDB (SEQRES) 6MTN DE 3H109L Fab heavy chain OS Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.500 CC R-Factor 0.225 FT #SUB 105 100B TYR H 108 138 ILE G Protein S 1 FT #SUB 105 100B TYR H 294 325 ASP G Protein S 3 FT #SUB 106 100C GLY H 296 327 ARG G Protein B 4 FT #SUB 107 100D MET H 299 330 HIS G Protein S 2 FT #SUB 107 100D MET H 383 415 THR G Protein S 1 FT #SUB 110 100G PHE H 297 328 GLN G Protein S 3 FT #SUB 110 100G PHE H 385 417 PRO G Protein S 1 FT #SUB 112 100I GLU H 296 327 ARG G Protein S 12 FT #SUB 112 100I GLU H 297 328 GLN G Protein S 5 FT #SUB 39 39 GLN H 36 38 HIS L Protein S 4 FT #SUB 39 39 GLN H 39 41 GLY L Protein S 2 FT #SUB 42 42 GLY H 4 6 SER L Protein B 1 FT #SUB 43 43 LYS H 4 6 SER L Protein A 3 FT #SUB 44 44 GLY H 4 6 SER L Protein B 1 FT #SUB 44 44 GLY H 88 87 TYR L Protein B 2 FT #SUB 45 45 LEU H 42 44 PRO L Protein S 2 FT #SUB 45 45 LEU H 88 87 TYR L Protein A 5 FT #SUB 45 45 LEU H 102 98 PHE L Protein A 3 FT #SUB 47 47 TRP H 90 89 HIS L Protein S 2 FT #SUB 47 47 TRP H 92 91 TRP L Protein S 2 FT #SUB 47 47 TRP H 99 95C SER L Protein S 2 FT #SUB 47 47 TRP H 100 96 TRP L Protein S 6 FT #SUB 47 47 TRP H 102 98 PHE L Protein A 4 FT #SUB 50 50 TYR H 98 95B PHE L Protein S 5 FT #SUB 50 50 TYR H 100 96 TRP L Protein S 2 FT #SUB 58 58 ASN H 98 95B PHE L Protein S 3 FT #SUB 58 58 ASN H 100 96 TRP L Protein A 4 FT #SUB 59 59 TYR H 100 96 TRP L Protein B 3 FT #SUB 60 60 ASN H 100 96 TRP L Protein A 6 FT #SUB 61 61 PRO H 100 96 TRP L Protein S 3 FT #SUB 94 91 TYR H 39 41 GLY L Protein S 1 FT #SUB 94 91 TYR H 40 42 GLN L Protein S 8 FT #SUB 94 91 TYR H 41 43 ALA L Protein S 4 FT #SUB 103 100 ARG H 28 30 SER L Protein S 1 FT #SUB 103 100 ARG H 29 31 ARG L Protein S 3 FT #SUB 103 100 ARG H 65 67 ASP L Protein S 4 FT #SUB 105 100B TYR H 28 30 SER L Protein S 2 FT #SUB 105 100B TYR H 94 93 SER L Protein S 7 FT #SUB 114 100K PHE H 28 30 SER L Protein S 2 FT #SUB 114 100K PHE H 92 91 TRP L Protein S 1 FT #SUB 114 100K PHE H 93 92 ASP L Protein S 9 FT #SUB 114 100K PHE H 94 93 SER L Protein S 3 FT #SUB 115 100L TYR H 92 91 TRP L Protein B 2 FT #SUB 116 100M TYR H 30 32 ALA L Protein S 3 FT #SUB 116 100M TYR H 32 34 GLN L Protein S 2 FT #SUB 116 100M TYR H 48 50 ASN L Protein S 5 FT #SUB 116 100M TYR H 92 91 TRP L Protein A 7 FT #SUB 117 100N TYR H 90 89 HIS L Protein B 2 FT #SUB 117 100N TYR H 92 91 TRP L Protein B 6 FT #SUB 117 100N TYR H 98 95B PHE L Protein S 2 FT #SUB 118 100O TYR H 32 34 GLN L Protein S 3 FT #SUB 118 100O TYR H 34 36 TYR L Protein A 3 FT #SUB 118 100O TYR H 44 46 LEU L Protein S 2 FT #SUB 118 100O TYR H 47 49 TYR L Protein S 8 FT #SUB 119 100P MET H 34 36 TYR L Protein A 3 FT #SUB 119 100P MET H 44 46 LEU L Protein B 4 FT #SUB 119 100P MET H 102 98 PHE L Protein S 1 FT #SUB 120 100Q ASP H 44 46 LEU L Protein B 1 FT #SUB 122 101 TRP H 42 44 PRO L Protein S 9 FT #SUB 123 102 GLY H 41 43 ALA L Protein B 1 FT #SUB 141 120 PHE H 129 125 GLU L Protein S 3 FT #SUB 142 121 PRO H 126 122 SER L Protein A 4 FT #SUB 142 121 PRO H 128 124 GLU L Protein S 6 FT #SUB 143 122 LEU H 123 119 PHE L Protein S 3 FT #SUB 143 122 LEU H 138 134 VAL L Protein S 2 FT #SUB 156 135 ALA H 123 119 PHE L Protein B 1 FT #SUB 160 139 LEU H 129 125 GLU L Protein S 1 FT #SUB 160 139 LEU H 182 178 TYR L Protein S 2 FT #SUB 162 141 LYS H 129 125 GLU L Protein S 4 FT #SUB 162 141 LYS H 134 130 LYS L Protein S 1 FT #SUB 183 162 HIS H 142 138 SER L Protein S 2 FT #SUB 183 162 HIS H 172 168 GLN L Protein S 5 FT #SUB 183 162 HIS H 178 174 ALA L Protein S 2 FT #SUB 185 164 PHE H 140 136 LEU L Protein S 1 FT #SUB 185 164 PHE H 141 137 ILE L Protein S 1 FT #SUB 185 164 PHE H 178 174 ALA L Protein S 1 FT #SUB 185 164 PHE H 179 175 ALA L Protein S 2 FT #SUB 185 164 PHE H 180 176 SER L Protein S 4 FT #SUB 186 165 PRO H 170 166 SER L Protein S 2 FT #SUB 187 166 ALA H 167 163 THR L Protein B 2 FT #SUB 188 167 VAL H 165 161 GLU L Protein S 1 FT #SUB 188 167 VAL H 167 163 THR L Protein S 1 FT #SUB 188 167 VAL H 182 178 TYR L Protein S 2 FT #SUB 189 168 LEU H 165 161 GLU L Protein B 1 FT #SUB 190 169 GLN H 165 161 GLU L Protein A 4 FT #SUB 191 170 SER H 165 161 GLU L Protein A 2 FT #SUB 197 176 LEU H 182 178 TYR L Protein B 1 FT #SUB 198 177 SER H 140 136 LEU L Protein S 1 FT #SUB 198 177 SER H 182 178 TYR L Protein A 3 FT #SUB 200 179 VAL H 123 119 PHE L Protein S 1 FT #SUB 200 179 VAL H 140 136 LEU L Protein S 2 FT #SUB 228 207 LYS H 128 124 GLU L Protein S 1 FT #HET 100 97 GLN H 27 9 MAN M B 1 FT #HET 101 98 GLY H 27 9 MAN M B 1 FT #HET 102 99 LYS H 27 9 MAN M A 3 FT #HET 103 100 ARG H 21 3 BMA M S 1 FT #HET 103 100 ARG H 22 4 MAN M S 8 FT #HET 103 100 ARG H 23 5 MAN M S 4 FT #HET 104 100A ILE H 21 3 BMA M A 5 FT #HET 104 100A ILE H 22 4 MAN M B 1 FT #HET 105 100B TYR H 22 4 MAN M A 2 FT #HET 106 100C GLY H 20 2 NAG M B 5 FT #HET 107 100D MET H 19 1 NAG M S 7 FT #HET 107 100D MET H 20 2 NAG M B 2 FT #HET 108 100E VAL H 20 2 NAG M A 2 FT DISORDER 147 152 FT DISORDER 233 244 CC SEQUENCE 226 AA (ATOM); CC QVQLQESGPG LVKPSETLSL TCTVSGGSIS NYYWSWIRQS PGKGLEWIGY ISDSESTNYN CC PSLKSRVIIS VDTSKNQLSL KLNSVTAADS AIYYCARAQQ GKRIYGMVSF GEFFYYYYMD CC VWGKGTTVTV SSASTKGPSV FPLAPSGTAA LGCLVKDYFP EPVTVSWNSG ALTSGVHTFP CC AVLQSSGLYS LSSVVTVPSS SLGTQTYICN VNHKPSNTKV DKKVEP CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGY CC ATOM QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGY CC ************************************************** CC SEQRES ISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQ CC ATOM ISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQ CC ************************************************** CC SEQRES GKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKST CC ATOM GKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPS---- CC ********************************************** CC SEQRES SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV CC ATOM --GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV CC ************************************************ CC SEQRES VTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ CC ATOM VTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP------------ CC ******************************** SQ SEQUENCE 244 AA; MW; CN; QVQLQESGPG LVKPSETLSL TCTVSGGSIS NYYWSWIRQS PGKGLEWIGY ISDSESTNYN PSLKSRVIIS VDTSKNQLSL KLNSVTAADS AIYYCARAQQ GKRIYGMVSF GEFFYYYYMD VWGKGTTVTV SSASTKGPSV FPLAPSSKST SGGTAALGCL VKDYFPEPVT VSWNSGALTS GVHTFPAVLQ SSGLYSLSSV VTVPSSSLGT QTYICNVNHK PSNTKVDKKV EPKSCDKGLE VLFQ // ID 6MTNL STANDARD; PRT; 217 AA. DT CONVERTED FROM PDB (SEQRES) 6MTN DE 3H109L Fab light chain OS Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.500 CC R-Factor 0.225 FT #SUB 26 28 LEU L 293 324 GLY G Protein B 4 FT #SUB 27 29 GLY L 293 324 GLY G Protein B 1 FT #SUB 27 29 GLY L 294 325 ASP G Protein B 2 FT #SUB 28 30 SER L 294 325 ASP G Protein A 10 FT #SUB 68 67C PHE L 292 323 ILE G Protein S 1 FT #SUB 68 67C PHE L 293 324 GLY G Protein S 4 FT #SUB 94 93 SER L 294 325 ASP G Protein S 2 FT #SUB 95 94 ARG L 105 135 THR G Protein A 9 FT #SUB 95 94 ARG L 106 136 ASN G Protein B 1 FT #SUB 95 94 ARG L 290 321A ASP G Protein S 1 FT #SUB 95 94 ARG L 291 322 ILE G Protein S 4 FT #SUB 95 94 ARG L 293 324 GLY G Protein S 3 FT #SUB 95 94 ARG L 295 326 ILE G Protein S 3 FT #SUB 96 95 SER L 107 137 ALA G Protein B 1 FT #SUB 97 95A GLY L 107 137 ALA G Protein B 1 FT #SUB 4 6 SER L 42 42 GLY H Protein B 1 FT #SUB 4 6 SER L 43 43 LYS H Protein B 3 FT #SUB 4 6 SER L 44 44 GLY H Protein B 1 FT #SUB 28 30 SER L 103 100 ARG H Protein S 1 FT #SUB 28 30 SER L 105 100B TYR H Protein S 2 FT #SUB 28 30 SER L 114 100K PHE H Protein B 2 FT #SUB 29 31 ARG L 103 100 ARG H Protein B 3 FT #SUB 30 32 ALA L 116 100M TYR H Protein S 3 FT #SUB 32 34 GLN L 116 100M TYR H Protein S 2 FT #SUB 32 34 GLN L 118 100O TYR H Protein S 3 FT #SUB 34 36 TYR L 118 100O TYR H Protein S 3 FT #SUB 34 36 TYR L 119 100P MET H Protein S 3 FT #SUB 36 38 HIS L 39 39 GLN H Protein S 4 FT #SUB 39 41 GLY L 39 39 GLN H Protein B 2 FT #SUB 39 41 GLY L 94 91 TYR H Protein B 1 FT #SUB 40 42 GLN L 94 91 TYR H Protein B 8 FT #SUB 41 43 ALA L 94 91 TYR H Protein A 4 FT #SUB 41 43 ALA L 123 102 GLY H Protein S 1 FT #SUB 42 44 PRO L 45 45 LEU H Protein S 2 FT #SUB 42 44 PRO L 122 101 TRP H Protein A 9 FT #SUB 44 46 LEU L 118 100O TYR H Protein S 2 FT #SUB 44 46 LEU L 119 100P MET H Protein S 4 FT #SUB 44 46 LEU L 120 100Q ASP H Protein S 1 FT #SUB 47 49 TYR L 118 100O TYR H Protein S 8 FT #SUB 48 50 ASN L 116 100M TYR H Protein S 5 FT #SUB 65 67 ASP L 103 100 ARG H Protein A 4 FT #SUB 88 87 TYR L 44 44 GLY H Protein S 2 FT #SUB 88 87 TYR L 45 45 LEU H Protein S 5 FT #SUB 90 89 HIS L 47 47 TRP H Protein S 2 FT #SUB 90 89 HIS L 117 100N TYR H Protein S 2 FT #SUB 92 91 TRP L 47 47 TRP H Protein S 2 FT #SUB 92 91 TRP L 114 100K PHE H Protein S 1 FT #SUB 92 91 TRP L 115 100L TYR H Protein S 2 FT #SUB 92 91 TRP L 116 100M TYR H Protein S 7 FT #SUB 92 91 TRP L 117 100N TYR H Protein S 6 FT #SUB 93 92 ASP L 114 100K PHE H Protein B 9 FT #SUB 94 93 SER L 105 100B TYR H Protein S 7 FT #SUB 94 93 SER L 114 100K PHE H Protein B 3 FT #SUB 98 95B PHE L 50 50 TYR H Protein S 5 FT #SUB 98 95B PHE L 58 58 ASN H Protein S 3 FT #SUB 98 95B PHE L 117 100N TYR H Protein S 2 FT #SUB 99 95C SER L 47 47 TRP H Protein B 2 FT #SUB 100 96 TRP L 47 47 TRP H Protein A 6 FT #SUB 100 96 TRP L 50 50 TYR H Protein S 2 FT #SUB 100 96 TRP L 58 58 ASN H Protein S 4 FT #SUB 100 96 TRP L 59 59 TYR H Protein S 3 FT #SUB 100 96 TRP L 60 60 ASN H Protein S 6 FT #SUB 100 96 TRP L 61 61 PRO H Protein S 3 FT #SUB 102 98 PHE L 45 45 LEU H Protein S 3 FT #SUB 102 98 PHE L 47 47 TRP H Protein S 4 FT #SUB 102 98 PHE L 119 100P MET H Protein S 1 FT #SUB 123 119 PHE L 143 122 LEU H Protein S 3 FT #SUB 123 119 PHE L 156 135 ALA H Protein S 1 FT #SUB 123 119 PHE L 200 179 VAL H Protein S 1 FT #SUB 126 122 SER L 142 121 PRO H Protein S 4 FT #SUB 128 124 GLU L 142 121 PRO H Protein S 6 FT #SUB 128 124 GLU L 228 207 LYS H Protein S 1 FT #SUB 129 125 GLU L 141 120 PHE H Protein A 3 FT #SUB 129 125 GLU L 160 139 LEU H Protein S 1 FT #SUB 129 125 GLU L 162 141 LYS H Protein S 4 FT #SUB 134 130 LYS L 162 141 LYS H Protein S 1 FT #SUB 138 134 VAL L 143 122 LEU H Protein S 2 FT #SUB 140 136 LEU L 185 164 PHE H Protein S 1 FT #SUB 140 136 LEU L 198 177 SER H Protein S 1 FT #SUB 140 136 LEU L 200 179 VAL H Protein S 2 FT #SUB 141 137 ILE L 185 164 PHE H Protein B 1 FT #SUB 142 138 SER L 183 162 HIS H Protein S 2 FT #SUB 165 161 GLU L 188 167 VAL H Protein S 1 FT #SUB 165 161 GLU L 189 168 LEU H Protein S 1 FT #SUB 165 161 GLU L 190 169 GLN H Protein S 4 FT #SUB 165 161 GLU L 191 170 SER H Protein S 2 FT #SUB 167 163 THR L 187 166 ALA H Protein S 2 FT #SUB 167 163 THR L 188 167 VAL H Protein S 1 FT #SUB 170 166 SER L 186 165 PRO H Protein S 2 FT #SUB 172 168 GLN L 183 162 HIS H Protein S 5 FT #SUB 178 174 ALA L 183 162 HIS H Protein S 2 FT #SUB 178 174 ALA L 185 164 PHE H Protein S 1 FT #SUB 179 175 ALA L 185 164 PHE H Protein B 2 FT #SUB 180 176 SER L 185 164 PHE H Protein S 4 FT #SUB 182 178 TYR L 160 139 LEU H Protein S 2 FT #SUB 182 178 TYR L 188 167 VAL H Protein S 2 FT #SUB 182 178 TYR L 197 176 LEU H Protein S 1 FT #SUB 182 178 TYR L 198 177 SER H Protein S 3 FT #HET 28 30 SER L 22 4 MAN M S 3 FT #HET 48 50 ASN L 23 5 MAN M S 5 FT #HET 49 51 ASN L 23 5 MAN M S 2 FT #HET 50 52 GLN L 23 5 MAN M S 9 FT #HET 50 52 GLN L 24 6 MAN M S 8 FT #HET 64 66 PRO L 23 5 MAN M A 3 FT #HET 64 66 PRO L 24 6 MAN M S 1 FT #HET 65 67 ASP L 22 4 MAN M B 5 FT #HET 65 67 ASP L 23 5 MAN M A 9 FT #HET 66 67A ILE L 22 4 MAN M B 7 FT DISORDER 1 3 FT DISORDER 215 217 CC SEQUENCE 211 AA (ATOM); CC SYVRPLSVAL GETASISCGR QALGSRAVQW YQHRPGQAPI LLIYNNQDRP SGIPERFSGT CC PDINFGTRAT LTISGVEAGD EADYYCHMWD SRSGFSWSFG GATRLTVLGQ PKAAPSVTLF CC PPSSEELQAN KATLVCLISD FYPGAVTVAW KADSSPVKAG VETTTPSKQS NNKYAASSYL CC SLTPMQWKMH KSYSCQVTHE GSTVEKTVAP T CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQ CC ATOM ---SYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQ CC *********************************************** CC SEQRES DRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSW CC ATOM DRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSW CC ************************************************** CC SEQRES SFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVT CC ATOM SFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVT CC ************************************************** CC SEQRES VAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQV CC ATOM VAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQV CC ************************************************** CC SEQRES THEGSTVEKTVAPTECS CC ATOM THEGSTVEKTVAPT--- CC ************** SQ SEQUENCE 217 AA; MW; CN; SVTSYVRPLS VALGETASIS CGRQALGSRA VQWYQHRPGQ APILLIYNNQ DRPSGIPERF SGTPDINFGT RATLTISGVE AGDEADYYCH MWDSRSGFSW SFGGATRLTV LGQPKAAPSV TLFPPSSEEL QANKATLVCL ISDFYPGAVT VAWKADSSPV KAGVETTTPS KQSNNKYAAS SYLSLTPMQW KMHKSYSCQV THEGSTVEKT VAPTECS //