ID 6MJJC STANDARD; PRT; 209 AA. DT CONVERTED FROM PDB (SEQRES) 6MJJ DE T cell receptor alpha variable 11,T cell receptor alpha variable 11,T cell DE receptor alpha joining 18,Human nkt tcr alpha chain, CHIMERIC PROTEIN OS Mus musculus, Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.930 CC R-Factor 0.186 FT #SUB 32 31 ASN C 99 98 TYR D Protein S 2 FT #SUB 33 32 HIS C 99 98 TYR D Protein S 12 FT #SUB 35 34 ARG C 100 99 THR D Protein S 1 FT #SUB 39 38 GLN C 38 37 GLN D Protein S 8 FT #SUB 39 38 GLN C 91 90 PHE D Protein S 1 FT #SUB 42 41 GLY C 108 107 ARG D Protein B 6 FT #SUB 45 44 LEU C 103 102 PHE D Protein S 1 FT #SUB 52 51 VAL C 99 98 TYR D Protein S 1 FT #SUB 90 89 ILE C 38 37 GLN D Protein S 1 FT #SUB 96 95 ARG C 99 98 TYR D Protein B 1 FT #SUB 97 96 GLY C 99 98 TYR D Protein B 4 FT #SUB 98 97 SER C 97 96 GLU D Protein A 3 FT #SUB 98 97 SER C 98 97 GLY D Protein B 1 FT #SUB 98 97 SER C 99 98 TYR D Protein B 7 FT #SUB 99 98 ALA C 32 31 ASN D Protein S 1 FT #SUB 99 98 ALA C 34 33 TYR D Protein B 1 FT #SUB 99 98 ALA C 96 95 ASP D Protein S 1 FT #SUB 99 98 ALA C 97 96 GLU D Protein A 6 FT #SUB 99 98 ALA C 98 97 GLY D Protein A 4 FT #SUB 102 101 ARG C 46 45 LEU D Protein S 1 FT #SUB 102 101 ARG C 49 48 TYR D Protein S 3 FT #SUB 102 101 ARG C 60 59 ASP D Protein S 1 FT #SUB 103 102 LEU C 36 35 TYR D Protein S 1 FT #SUB 103 102 LEU C 101 100 GLN D Protein S 2 FT #SUB 105 104 PHE C 36 35 TYR D Protein S 1 FT #SUB 105 104 PHE C 43 42 GLY D Protein A 2 FT #SUB 105 104 PHE C 44 43 LEU D Protein S 9 FT #SUB 105 104 PHE C 103 102 PHE D Protein S 1 FT #SUB 106 105 GLY C 43 42 GLY D Protein B 2 FT #SUB 107 106 ALA C 41 40 GLY D Protein S 2 FT #SUB 107 106 ALA C 42 41 HIS D Protein A 3 FT #SUB 107 106 ALA C 43 42 GLY D Protein A 2 FT #SUB 121 120 ASP C 135 134 HIS D Protein S 6 FT #SUB 125 124 TYR C 129 128 SER D Protein S 3 FT #SUB 125 124 TYR C 131 130 ALA D Protein S 3 FT #SUB 125 124 TYR C 132 131 GLU D Protein S 13 FT #SUB 125 124 TYR C 135 134 HIS D Protein S 3 FT #SUB 125 124 TYR C 136 135 THR D Protein S 1 FT #SUB 126 125 GLN C 129 128 SER D Protein B 2 FT #SUB 127 126 LEU C 126 125 PHE D Protein A 2 FT #SUB 127 126 LEU C 127 126 GLU D Protein A 4 FT #SUB 127 126 LEU C 140 139 THR D Protein S 1 FT #SUB 127 126 LEU C 142 141 VAL D Protein S 1 FT #SUB 128 127 ARG C 126 125 PHE D Protein B 4 FT #SUB 128 127 ARG C 127 126 GLU D Protein B 4 FT #SUB 129 128 ASP C 124 123 SER D Protein S 2 FT #SUB 129 128 ASP C 125 124 LEU D Protein A 3 FT #SUB 129 128 ASP C 126 125 PHE D Protein A 6 FT #SUB 130 129 SER C 125 124 LEU D Protein A 4 FT #SUB 130 129 SER C 127 126 GLU D Protein A 4 FT #SUB 130 129 SER C 236 235 GLU D Protein S 3 FT #SUB 130 129 SER C 237 236 ALA D Protein S 1 FT #SUB 131 130 LYS C 236 235 GLU D Protein S 2 FT #SUB 136 135 SER C 126 125 PHE D Protein B 4 FT #SUB 137 136 VAL C 126 125 PHE D Protein A 10 FT #SUB 139 138 LEU C 140 139 THR D Protein S 3 FT #SUB 141 140 THR C 193 192 ARG D Protein S 1 FT #SUB 142 141 ASP C 136 135 THR D Protein S 1 FT #SUB 142 141 ASP C 193 192 ARG D Protein S 9 FT #SUB 158 157 TYR C 175 174 LEU D Protein S 1 FT #SUB 158 157 TYR C 177 176 GLU D Protein S 8 FT #SUB 160 159 THR C 171 170 ASP D Protein S 6 FT #SUB 160 159 THR C 189 188 SER D Protein S 1 FT #SUB 163 162 CYS C 169 168 CYS D Protein A 9 FT #SUB 163 162 CYS C 170 169 THR D Protein S 2 FT #SUB 163 162 CYS C 191 190 ARG D Protein S 4 FT #SUB 164 163 VAL C 169 168 CYS D Protein B 2 FT #SUB 165 164 LEU C 167 166 GLY D Protein S 4 FT #SUB 165 164 LEU C 168 167 VAL D Protein S 2 FT #SUB 165 164 LEU C 169 168 CYS D Protein A 3 FT #SUB 165 164 LEU C 193 192 ARG D Protein S 2 FT #SUB 166 165 ASP C 166 165 SER D Protein B 3 FT #SUB 166 165 ASP C 167 166 GLY D Protein B 4 FT #SUB 167 166 MET C 138 137 LYS D Protein S 2 FT #SUB 167 166 MET C 166 165 SER D Protein B 2 FT #SUB 167 166 MET C 193 192 ARG D Protein S 4 FT #SUB 167 166 MET C 194 193 VAL D Protein S 2 FT #SUB 168 167 ARG C 166 165 SER D Protein A 4 FT #SUB 170 169 MET C 195 194 SER D Protein S 1 FT #SUB 172 171 PHE C 138 137 LYS D Protein S 5 FT #SUB 172 171 PHE C 193 192 ARG D Protein S 2 FT #SUB 174 173 SER C 193 192 ARG D Protein S 3 FT #SUB 176 175 SER C 191 190 ARG D Protein S 2 FT #SUB 178 177 VAL C 191 190 ARG D Protein S 1 FT #SUB 180 179 TRP C 144 143 LEU D Protein S 6 FT #SUB 180 179 TRP C 175 174 LEU D Protein S 1 FT #SUB 180 179 TRP C 187 186 SER D Protein S 2 FT #SUB 202 201 PHE C 135 134 HIS D Protein S 2 FT #SUB 204 203 PRO C 131 130 ALA D Protein S 2 FT #SUB 29 28 THR C 72 72 VAL A Protein S 1 FT #SUB 30 29 PRO C 72 72 VAL A Protein S 1 FT #SUB 30 29 PRO C 76 76 SER A Protein S 1 FT #SUB 95 94 ASP C 79 79 ARG A Protein S 9 FT #SUB 96 95 ARG C 76 76 SER A Protein S 8 FT #SUB 96 95 ARG C 79 79 ARG A Protein S 10 FT #SUB 96 95 ARG C 80 80 ASP A Protein S 6 FT #SUB 97 96 GLY C 152 152 ALA A Protein B 2 FT #SUB 97 96 GLY C 153 153 ASP A Protein B 6 FT #SUB 98 97 SER C 149 149 VAL A Protein S 1 FT #SUB 100 99 LEU C 79 79 ARG A Protein B 2 FT #SUB 100 99 LEU C 80 80 ASP A Protein S 4 FT #SUB 100 99 LEU C 83 83 GLU A Protein S 1 FT #SUB 100 99 LEU C 87 87 MET A Protein S 1 FT #SUB 100 99 LEU C 149 149 VAL A Protein S 3 FT #SUB 101 100 GLY C 79 79 ARG A Protein B 1 FT #SUB 102 101 ARG C 79 79 ARG A Protein A 3 FT #SUB 102 101 ARG C 83 83 GLU A Protein S 1 FT #HET 3 2 THR C 11 606 NA C S 3 FT #HET 3 2 THR C 14 609 GOL C S 1 FT #HET 5 4 VAL C 11 606 NA C B 1 FT #HET 12 11 LEU C 12 607 NA C S 1 FT #HET 20 19 CYS C 12 607 NA C A 2 FT #HET 21 20 VAL C 12 607 NA C B 2 FT #HET 30 29 PRO C 22 308 JU4 A S 4 FT #HET 32 31 ASN C 22 308 JU4 A A 7 FT #HET 32 31 ASN C 23 309 NA A S 3 FT #HET 33 32 HIS C 7 602 GOL C S 4 FT #HET 35 34 ARG C 6 601 GOL C S 4 FT #HET 35 34 ARG C 7 602 GOL C S 13 FT #HET 37 36 PHE C 6 601 GOL C S 2 FT #HET 37 36 PHE C 7 602 GOL C S 2 FT #HET 39 38 GLN C 8 603 GOL C A 11 FT #HET 40 39 ASP C 8 603 GOL C B 3 FT #HET 41 40 THR C 8 603 GOL C B 4 FT #HET 42 41 GLY C 8 603 GOL C B 1 FT #HET 47 46 SER C 6 601 GOL C S 1 FT #HET 47 46 SER C 13 608 NA C A 4 FT #HET 48 47 LEU C 13 608 NA C B 2 FT #HET 49 48 THR C 13 608 NA C B 2 FT #HET 69 68 LYS C 22 308 JU4 A S 1 FT #HET 88 87 THR C 8 603 GOL C A 8 FT #HET 95 94 ASP C 22 308 JU4 A B 1 FT #HET 96 95 ARG C 22 308 JU4 A A 7 FT #HET 97 96 GLY C 15 610 NA C B 3 FT #HET 97 96 GLY C 16 301 GOL D B 1 FT #HET 97 96 GLY C 22 308 JU4 A B 3 FT #HET 97 96 GLY C 23 309 NA A B 1 FT #HET 99 98 ALA C 17 302 NA D S 1 FT #HET 100 99 LEU C 10 605 NA C B 2 FT #HET 101 100 GLY C 10 605 NA C B 2 FT #HET 102 101 ARG C 10 605 NA C S 3 FT #HET 103 102 LEU C 7 602 GOL C S 4 FT #HET 105 104 PHE C 11 606 NA C B 2 FT #HET 105 104 PHE C 14 609 GOL C B 2 FT #HET 106 105 GLY C 11 606 NA C B 2 FT #HET 107 106 ALA C 11 606 NA C B 1 FT #HET 126 125 GLN C 19 304 NA D B 2 FT #HET 135 134 LYS C 9 604 GOL C S 4 FT #HET 136 135 SER C 9 604 GOL C B 3 FT #HET 180 179 TRP C 9 604 GOL C S 1 FT DISORDER 1 1 FT DISORDER 183 185 FT DISORDER 206 209 CC SEQUENCE 201 AA (ATOM); CC KTQVEQSPQS LVVRQGENCV LQCNYSVTPD NHLRWFKQDT GKGLVSLTVL VDQKDKTSNG CC RYSATLDKDA KHSTLHITAT LLDDTATYIC VVGDRGSALG RLHFGAGTQL IVIPDIQNPD CC PAVYQLRDSK SSDKSVCLFT DFDSQTNVSQ SKDSDVYITD KCVLDMRSMD FKSNSAVAWS CC NFACANAFNN SIIPEDTFFP S CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES MKTQVEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWFKQDTGKGLVSLTV CC ATOM -KTQVEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWFKQDTGKGLVSLTV CC ************************************************* CC SEQRES LVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYICVVGDRGSAL CC ATOM LVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYICVVGDRGSAL CC ************************************************** CC SEQRES GRLHFGAGTQLIVIPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVS CC ATOM GRLHFGAGTQLIVIPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVS CC ************************************************** CC SEQRES QSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPED CC ATOM QSKDSDVYITDKCVLDMRSMDFKSNSAVAWSN---FACANAFNNSIIPED CC ******************************** *************** CC SEQRES TFFPSPESS CC ATOM TFFPS---- CC ***** SQ SEQUENCE 209 AA; MW; CN; MKTQVEQSPQ SLVVRQGENC VLQCNYSVTP DNHLRWFKQD TGKGLVSLTV LVDQKDKTSN GRYSATLDKD AKHSTLHITA TLLDDTATYI CVVGDRGSAL GRLHFGAGTQ LIVIPDIQNP DPAVYQLRDS KSSDKSVCLF TDFDSQTNVS QSKDSDVYIT DKCVLDMRSM DFKSNSAVAW SNKSDFACAN AFNNSIIPED TFFPSPESS // ID 6MJJD STANDARD; PRT; 241 AA. DT CONVERTED FROM PDB (SEQRES) 6MJJ DE Beta-chain,Tcell receptor chain,T cell receptor beta constant 2, CHIMERIC P DE ROTEIN OS Mus musculus, Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.930 CC R-Factor 0.186 FT #SUB 32 31 ASN D 99 98 ALA C Protein S 1 FT #SUB 34 33 TYR D 99 98 ALA C Protein S 1 FT #SUB 36 35 TYR D 103 102 LEU C Protein S 1 FT #SUB 36 35 TYR D 105 104 PHE C Protein S 1 FT #SUB 38 37 GLN D 39 38 GLN C Protein S 8 FT #SUB 38 37 GLN D 90 89 ILE C Protein S 1 FT #SUB 41 40 GLY D 107 106 ALA C Protein B 2 FT #SUB 42 41 HIS D 107 106 ALA C Protein B 3 FT #SUB 43 42 GLY D 105 104 PHE C Protein B 2 FT #SUB 43 42 GLY D 106 105 GLY C Protein B 2 FT #SUB 43 42 GLY D 107 106 ALA C Protein B 2 FT #SUB 44 43 LEU D 105 104 PHE C Protein A 9 FT #SUB 46 45 LEU D 102 101 ARG C Protein S 1 FT #SUB 49 48 TYR D 102 101 ARG C Protein S 3 FT #SUB 60 59 ASP D 102 101 ARG C Protein S 1 FT #SUB 91 90 PHE D 39 38 GLN C Protein S 1 FT #SUB 96 95 ASP D 99 98 ALA C Protein B 1 FT #SUB 97 96 GLU D 98 97 SER C Protein B 3 FT #SUB 97 96 GLU D 99 98 ALA C Protein B 6 FT #SUB 98 97 GLY D 98 97 SER C Protein B 1 FT #SUB 98 97 GLY D 99 98 ALA C Protein B 4 FT #SUB 99 98 TYR D 32 31 ASN C Protein S 2 FT #SUB 99 98 TYR D 33 32 HIS C Protein S 12 FT #SUB 99 98 TYR D 52 51 VAL C Protein S 1 FT #SUB 99 98 TYR D 96 95 ARG C Protein S 1 FT #SUB 99 98 TYR D 97 96 GLY C Protein S 4 FT #SUB 99 98 TYR D 98 97 SER C Protein A 7 FT #SUB 100 99 THR D 35 34 ARG C Protein S 1 FT #SUB 101 100 GLN D 103 102 LEU C Protein S 2 FT #SUB 103 102 PHE D 45 44 LEU C Protein S 1 FT #SUB 103 102 PHE D 105 104 PHE C Protein S 1 FT #SUB 108 107 ARG D 42 41 GLY C Protein S 6 FT #SUB 124 123 SER D 129 128 ASP C Protein S 2 FT #SUB 125 124 LEU D 129 128 ASP C Protein B 3 FT #SUB 125 124 LEU D 130 129 SER C Protein B 4 FT #SUB 126 125 PHE D 127 126 LEU C Protein S 2 FT #SUB 126 125 PHE D 128 127 ARG C Protein A 4 FT #SUB 126 125 PHE D 129 128 ASP C Protein S 6 FT #SUB 126 125 PHE D 136 135 SER C Protein S 4 FT #SUB 126 125 PHE D 137 136 VAL C Protein S 10 FT #SUB 127 126 GLU D 127 126 LEU C Protein B 4 FT #SUB 127 126 GLU D 128 127 ARG C Protein A 4 FT #SUB 127 126 GLU D 130 129 SER C Protein S 4 FT #SUB 129 128 SER D 125 124 TYR C Protein S 3 FT #SUB 129 128 SER D 126 125 GLN C Protein S 2 FT #SUB 131 130 ALA D 125 124 TYR C Protein A 3 FT #SUB 131 130 ALA D 204 203 PRO C Protein S 2 FT #SUB 132 131 GLU D 125 124 TYR C Protein A 13 FT #SUB 135 134 HIS D 121 120 ASP C Protein S 6 FT #SUB 135 134 HIS D 125 124 TYR C Protein S 3 FT #SUB 135 134 HIS D 202 201 PHE C Protein S 2 FT #SUB 136 135 THR D 125 124 TYR C Protein S 1 FT #SUB 136 135 THR D 142 141 ASP C Protein S 1 FT #SUB 138 137 LYS D 167 166 MET C Protein S 2 FT #SUB 138 137 LYS D 172 171 PHE C Protein S 5 FT #SUB 140 139 THR D 127 126 LEU C Protein B 1 FT #SUB 140 139 THR D 139 138 LEU C Protein S 3 FT #SUB 142 141 VAL D 127 126 LEU C Protein S 1 FT #SUB 144 143 LEU D 180 179 TRP C Protein S 6 FT #SUB 166 165 SER D 166 165 ASP C Protein A 3 FT #SUB 166 165 SER D 167 166 MET C Protein S 2 FT #SUB 166 165 SER D 168 167 ARG C Protein S 4 FT #SUB 167 166 GLY D 165 164 LEU C Protein B 4 FT #SUB 167 166 GLY D 166 165 ASP C Protein B 4 FT #SUB 168 167 VAL D 165 164 LEU C Protein B 2 FT #SUB 169 168 CYS D 163 162 CYS C Protein A 9 FT #SUB 169 168 CYS D 164 163 VAL C Protein S 2 FT #SUB 169 168 CYS D 165 164 LEU C Protein S 3 FT #SUB 170 169 THR D 163 162 CYS C Protein B 2 FT #SUB 171 170 ASP D 160 159 THR C Protein S 6 FT #SUB 175 174 LEU D 158 157 TYR C Protein S 1 FT #SUB 175 174 LEU D 180 179 TRP C Protein S 1 FT #SUB 177 176 GLU D 158 157 TYR C Protein A 8 FT #SUB 187 186 SER D 180 179 TRP C Protein S 2 FT #SUB 189 188 SER D 160 159 THR C Protein S 1 FT #SUB 191 190 ARG D 163 162 CYS C Protein S 4 FT #SUB 191 190 ARG D 176 175 SER C Protein S 2 FT #SUB 191 190 ARG D 178 177 VAL C Protein S 1 FT #SUB 193 192 ARG D 141 140 THR C Protein S 1 FT #SUB 193 192 ARG D 142 141 ASP C Protein S 9 FT #SUB 193 192 ARG D 165 164 LEU C Protein S 2 FT #SUB 193 192 ARG D 167 166 MET C Protein A 4 FT #SUB 193 192 ARG D 172 171 PHE C Protein S 2 FT #SUB 193 192 ARG D 174 173 SER C Protein S 3 FT #SUB 194 193 VAL D 167 166 MET C Protein B 2 FT #SUB 195 194 SER D 170 169 MET C Protein S 1 FT #SUB 236 235 GLU D 130 129 SER C Protein B 3 FT #SUB 236 235 GLU D 131 130 LYS C Protein A 2 FT #SUB 237 236 ALA D 130 129 SER C Protein S 1 FT #SUB 49 48 TYR D 83 83 GLU A Protein S 5 FT #SUB 49 48 TYR D 86 86 LYS A Protein S 3 FT #SUB 51 50 TYR D 83 83 GLU A Protein S 7 FT #SUB 51 50 TYR D 86 86 LYS A Protein S 3 FT #SUB 51 50 TYR D 87 87 MET A Protein S 7 FT #SUB 57 56 GLU D 21 21 ARG A Protein S 5 FT #SUB 57 56 GLU D 86 86 LYS A Protein S 9 FT #SUB 97 96 GLU D 148 148 LYS A Protein S 7 FT #SUB 97 96 GLU D 149 149 VAL A Protein S 1 FT #SUB 97 96 GLU D 152 152 ALA A Protein A 3 FT #HET 19 18 LYS D 18 303 NA D S 1 FT #HET 32 31 ASN D 17 302 NA D S 2 FT #HET 34 33 TYR D 17 302 NA D S 3 FT #HET 38 37 GLN D 8 603 GOL C S 1 FT #HET 42 41 HIS D 14 609 GOL C A 3 FT #HET 43 42 GLY D 11 606 NA C B 1 FT #HET 43 42 GLY D 14 609 GOL C B 7 FT #HET 44 43 LEU D 14 609 GOL C B 1 FT #HET 45 44 ARG D 14 609 GOL C S 3 FT #HET 51 50 TYR D 10 605 NA C S 1 FT #HET 66 65 LYS D 18 303 NA D S 1 FT #HET 80 79 GLU D 18 303 NA D S 2 FT #HET 95 94 GLY D 17 302 NA D B 4 FT #HET 96 95 ASP D 17 302 NA D B 2 FT #HET 98 97 GLY D 16 301 GOL D B 5 FT #HET 98 97 GLY D 17 302 NA D B 1 FT #HET 99 98 TYR D 7 602 GOL C B 2 FT #HET 99 98 TYR D 15 610 NA C S 2 FT #HET 99 98 TYR D 16 301 GOL D A 10 FT #HET 100 99 THR D 7 602 GOL C A 4 FT #HET 100 99 THR D 16 301 GOL D A 5 FT #HET 101 100 GLN D 6 601 GOL C B 3 FT #HET 101 100 GLN D 7 602 GOL C A 10 FT #HET 102 101 TYR D 6 601 GOL C B 2 FT #HET 103 102 PHE D 6 601 GOL C A 4 FT #HET 103 102 PHE D 7 602 GOL C S 2 FT #HET 126 125 PHE D 9 604 GOL C S 2 FT #HET 129 128 SER D 19 304 NA D S 1 FT #HET 131 130 ALA D 19 304 NA D S 1 FT #HET 144 143 LEU D 9 604 GOL C S 1 FT #HET 146 145 THR D 9 604 GOL C S 1 FT DISORDER 1 2 CC SEQUENCE 239 AA (ATOM); CC AAVTQSPRNK VAVTGGKVTL SCNQTNNHNN MYWYRQDTGH GLRLIHYSYG AGSTEKGDIP CC DGYKASRPSQ ENFSLILELA TPSQTSVYFC ASGDEGYTQY FGPGTRLLVL EDLRNVTPPK CC VSLFEPSKAE ISHTQKATLV CLATGFYPDH VELSWWVNGK EVHSGVCTDP QPLKEQPALN CC DSRYSLSSRL RVSATFWQNP RNHFRCQVQF YGLSENDEWT QDRAKPVTQI VSAEAWGRA CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES MEAAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYS CC ATOM --AAVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYS CC ************************************************ CC SEQRES YGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDEGYT CC ATOM YGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDEGYT CC ************************************************** CC SEQRES QYFGPGTRLLVLEDLRNVTPPKVSLFEPSKAEISHTQKATLVCLATGFYP CC ATOM QYFGPGTRLLVLEDLRNVTPPKVSLFEPSKAEISHTQKATLVCLATGFYP CC ************************************************** CC SEQRES DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQ CC ATOM DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQ CC ************************************************** CC SEQRES NPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA CC ATOM NPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRA CC ***************************************** SQ SEQUENCE 241 AA; MW; CN; MEAAVTQSPR NKVAVTGGKV TLSCNQTNNH NNMYWYRQDT GHGLRLIHYS YGAGSTEKGD IPDGYKASRP SQENFSLILE LATPSQTSVY FCASGDEGYT QYFGPGTRLL VLEDLRNVTP PKVSLFEPSK AEISHTQKAT LVCLATGFYP DHVELSWWVN GKEVHSGVCT DPQPLKEQPA LNDSRYSLSS RLRVSATFWQ NPRNHFRCQV QFYGLSENDE WTQDRAKPVT QIVSAEAWGR A // ID 6MJJA STANDARD; PRT; 285 AA. DT CONVERTED FROM PDB (SEQRES) 6MJJ DE Antigen-presenting glycoprotein CD1d1 OS Mus musculus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.930 CC R-Factor 0.186 FT #SUB 72 72 VAL A 29 28 THR C Protein S 1 FT #SUB 72 72 VAL A 30 29 PRO C Protein S 1 FT #SUB 76 76 SER A 30 29 PRO C Protein S 1 FT #SUB 76 76 SER A 96 95 ARG C Protein A 8 FT #SUB 79 79 ARG A 95 94 ASP C Protein S 9 FT #SUB 79 79 ARG A 96 95 ARG C Protein S 10 FT #SUB 79 79 ARG A 100 99 LEU C Protein S 2 FT #SUB 79 79 ARG A 101 100 GLY C Protein S 1 FT #SUB 79 79 ARG A 102 101 ARG C Protein S 3 FT #SUB 80 80 ASP A 96 95 ARG C Protein S 6 FT #SUB 80 80 ASP A 100 99 LEU C Protein S 4 FT #SUB 83 83 GLU A 100 99 LEU C Protein S 1 FT #SUB 83 83 GLU A 102 101 ARG C Protein S 1 FT #SUB 87 87 MET A 100 99 LEU C Protein S 1 FT #SUB 149 149 VAL A 98 97 SER C Protein B 1 FT #SUB 149 149 VAL A 100 99 LEU C Protein S 3 FT #SUB 152 152 ALA A 97 96 GLY C Protein B 2 FT #SUB 153 153 ASP A 97 96 GLY C Protein A 6 FT #SUB 21 21 ARG A 57 56 GLU D Protein S 5 FT #SUB 83 83 GLU A 49 48 TYR D Protein S 5 FT #SUB 83 83 GLU A 51 50 TYR D Protein A 7 FT #SUB 86 86 LYS A 49 48 TYR D Protein S 3 FT #SUB 86 86 LYS A 51 50 TYR D Protein A 3 FT #SUB 86 86 LYS A 57 56 GLU D Protein S 9 FT #SUB 87 87 MET A 51 50 TYR D Protein A 7 FT #SUB 148 148 LYS A 97 96 GLU D Protein A 7 FT #SUB 149 149 VAL A 97 96 GLU D Protein S 1 FT #SUB 152 152 ALA A 97 96 GLU D Protein S 3 FT #SUB 13 13 LEU A 55 55 SER B Protein S 1 FT #SUB 13 13 LEU A 56 56 PHE B Protein S 4 FT #SUB 14 14 GLN A 56 56 PHE B Protein B 2 FT #SUB 15 15 MET A 54 54 MET B Protein S 2 FT #SUB 15 15 MET A 56 56 PHE B Protein S 2 FT #SUB 15 15 MET A 62 62 PHE B Protein S 3 FT #SUB 17 17 SER A 33 33 PRO B Protein S 1 FT #SUB 29 29 VAL A 53 53 ASP B Protein S 1 FT #SUB 29 29 VAL A 54 54 MET B Protein S 1 FT #SUB 29 29 VAL A 55 55 SER B Protein S 2 FT #SUB 31 31 TRP A 55 55 SER B Protein S 2 FT #SUB 31 31 TRP A 63 63 TYR B Protein S 1 FT #SUB 36 36 GLN A 53 53 ASP B Protein S 4 FT #SUB 39 39 ARG A 53 53 ASP B Protein S 9 FT #SUB 97 97 GLU A 33 33 PRO B Protein S 5 FT #SUB 97 97 GLU A 62 62 PHE B Protein S 1 FT #SUB 99 99 GLN A 56 56 PHE B Protein S 6 FT #SUB 99 99 GLN A 60 60 TRP B Protein A 8 FT #SUB 99 99 GLN A 62 62 PHE B Protein S 4 FT #SUB 100 100 LEU A 56 56 PHE B Protein B 1 FT #SUB 101 101 SER A 60 60 TRP B Protein S 1 FT #SUB 117 117 HIS A 60 60 TRP B Protein B 1 FT #SUB 119 119 ALA A 60 60 TRP B Protein S 5 FT #SUB 122 122 GLY A 60 60 TRP B Protein B 1 FT #SUB 124 124 TYR A 60 60 TRP B Protein S 1 FT #SUB 190 190 VAL A 14 14 PRO B Protein S 1 FT #SUB 192 192 TRP A 11 11 SER B Protein S 2 FT #SUB 192 192 TRP A 13 13 HIS B Protein S 4 FT #SUB 192 192 TRP A 14 14 PRO B Protein S 11 FT #SUB 192 192 TRP A 15 15 PRO B Protein S 3 FT #SUB 194 194 SER A 97 97 ARG B Protein S 1 FT #SUB 194 194 SER A 98 98 ASP B Protein A 7 FT #SUB 195 195 SER A 98 98 ASP B Protein B 4 FT #SUB 196 196 VAL A 98 98 ASP B Protein S 3 FT #SUB 196 196 VAL A 99 99 MET B Protein S 3 FT #SUB 207 207 VAL A 98 98 ASP B Protein S 1 FT #SUB 207 207 VAL A 99 99 MET B Protein S 1 FT #SUB 209 209 HIS A 97 97 ARG B Protein S 2 FT #SUB 209 209 HIS A 99 99 MET B Protein S 3 FT #SUB 211 211 SER A 12 12 ARG B Protein S 4 FT #SUB 212 212 GLY A 12 12 ARG B Protein B 4 FT #SUB 238 238 LEU A 8 8 GLN B Protein S 4 FT #SUB 238 238 LEU A 10 10 TYR B Protein A 6 FT #SUB 238 238 LEU A 26 26 TYR B Protein S 1 FT #SUB 239 239 PRO A 10 10 TYR B Protein A 6 FT #SUB 239 239 PRO A 26 26 TYR B Protein S 9 FT #SUB 239 239 PRO A 65 65 LEU B Protein B 2 FT #SUB 240 240 ASN A 10 10 TYR B Protein S 1 FT #SUB 240 240 ASN A 12 12 ARG B Protein S 7 FT #SUB 240 240 ASN A 24 24 ASN B Protein S 1 FT #SUB 240 240 ASN A 65 65 LEU B Protein B 2 FT #SUB 241 241 ALA A 65 65 LEU B Protein B 2 FT #SUB 241 241 ALA A 67 67 HIS B Protein S 5 FT #SUB 242 242 ASP A 12 12 ARG B Protein S 7 FT #SUB 244 244 THR A 12 12 ARG B Protein S 3 FT #SUB 246 246 TYR A 10 10 TYR B Protein S 4 FT #SUB 246 246 TYR A 11 11 SER B Protein S 2 FT #SUB 248 248 GLN A 99 99 MET B Protein S 3 FT #HET 10 10 PHE A 22 308 JU4 A S 2 FT #HET 12 12 CYS A 22 308 JU4 A S 1 FT #HET 13 13 LEU A 24 101 GOL B S 1 FT #HET 14 14 GLN A 22 308 JU4 A S 3 FT #HET 19 19 ALA A 21 304 NAG A S 3 FT #HET 23 23 TRP A 1 1 NAG E S 3 FT #HET 23 23 TRP A 21 304 NAG A S 9 FT #HET 24 24 SER A 1 1 NAG E B 6 FT #HET 28 28 SER A 22 308 JU4 A S 2 FT #HET 30 30 VAL A 22 308 JU4 A S 1 FT #HET 31 31 TRP A 25 102 GOL B S 2 FT #HET 47 47 ILE A 22 308 JU4 A S 1 FT #HET 49 49 PHE A 20 301 GOL A S 5 FT #HET 55 55 GLN A 20 301 GOL A S 3 FT #HET 60 60 ASN A 20 301 GOL A S 1 FT #HET 63 63 TRP A 22 308 JU4 A S 1 FT #HET 69 69 MET A 22 308 JU4 A S 1 FT #HET 70 70 PHE A 22 308 JU4 A S 8 FT #HET 73 73 TYR A 22 308 JU4 A A 14 FT #HET 76 76 SER A 22 308 JU4 A S 4 FT #HET 80 80 ASP A 22 308 JU4 A S 8 FT #HET 81 81 ILE A 22 308 JU4 A S 1 FT #HET 83 83 GLU A 10 605 NA C S 3 FT #HET 97 97 GLU A 26 103 GOL B S 3 FT #HET 99 99 GLN A 26 103 GOL B S 5 FT #HET 100 100 LEU A 22 308 JU4 A S 1 FT #HET 101 101 SER A 24 101 GOL B S 6 FT #HET 102 102 ALA A 22 308 JU4 A S 2 FT #HET 113 113 GLU A 5 3 FUC F B 2 FT #HET 114 114 SER A 5 3 FUC F A 8 FT #HET 117 117 HIS A 24 101 GOL B S 1 FT #HET 120 120 PHE A 22 308 JU4 A S 1 FT #HET 121 121 GLN A 26 103 GOL B B 2 FT #HET 122 122 GLY A 26 103 GOL B B 8 FT #HET 128 128 PHE A 5 3 FUC F S 1 FT #HET 129 129 TRP A 4 2 NAG F S 1 FT #HET 130 130 GLY A 3 1 NAG F B 7 FT #HET 130 130 GLY A 4 2 NAG F B 2 FT #HET 130 130 GLY A 5 3 FUC F B 5 FT #HET 131 131 THR A 3 1 NAG F S 1 FT #HET 131 131 THR A 4 2 NAG F S 2 FT #HET 133 133 TRP A 22 308 JU4 A S 6 FT #HET 142 142 TRP A 22 308 JU4 A S 1 FT #HET 150 150 LEU A 22 308 JU4 A S 2 FT #HET 152 152 ALA A 15 610 NA C B 1 FT #HET 153 153 ASP A 15 610 NA C B 1 FT #HET 153 153 ASP A 22 308 JU4 A S 12 FT #HET 153 153 ASP A 23 309 NA A S 1 FT #HET 154 154 GLN A 15 610 NA C A 3 FT #HET 154 154 GLN A 23 309 NA A B 1 FT #HET 155 155 GLY A 22 308 JU4 A B 9 FT #HET 155 155 GLY A 23 309 NA A B 2 FT #HET 156 156 THR A 22 308 JU4 A A 10 FT #HET 159 159 THR A 22 308 JU4 A S 2 FT #HET 160 160 VAL A 22 308 JU4 A S 1 FT #HET 161 161 GLN A 3 1 NAG F S 9 FT #HET 163 163 LEU A 22 308 JU4 A S 1 FT #HET 164 164 LEU A 5 3 FUC F S 1 FT #HET 165 165 ASN A 5 3 FUC F S 3 FT #HET 168 168 CYS A 22 308 JU4 A A 3 FT #HET 171 171 PHE A 22 308 JU4 A S 3 FT #HET 239 239 PRO A 25 102 GOL B S 1 FT #HET 240 240 ASN A 25 102 GOL B B 1 FT #MOD 20 20 ASN A 21 304 NAG A S FT #MOD 42 42 ASN A 1 1 NAG E S FT #MOD 165 165 ASN A 3 1 NAG F S FT DISORDER 1 6 FT DISORDER 280 285 CC SEQUENCE 273 AA (ATOM); CC NYTFRCLQMS SFANRSWSRT DSVVWLGDLQ THRWSNDSAT ISFTKPWSQG KLSNQQWEKL CC QHMFQVYRVS FTRDIQELVK MMSPKEDYPI EIQLSAGCEM YPGNASESFL HVAFQGKYVV CC RFWGTSWQTV PGAPSWLDLP IKVLNADQGT SATVQMLLND TCPLFVRGLL EAGKSDLEKQ CC EKPVAWLSSV PSSAHGHRQL VCHVSGFYPK PVWVMWMRGD QEQQGTHRGD FLPNADETWY CC LQATLDVEAG EEAGLACRVK HSSLGGQDII LYW CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFT CC ATOM ------NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFT CC ******************************************** CC SEQRES KPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQL CC ATOM KPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQL CC ************************************************** CC SEQRES SAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVL CC ATOM SAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVL CC ************************************************** CC SEQRES NADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSA CC ATOM NADQGTSATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSA CC ************************************************** CC SEQRES HGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQAT CC ATOM HGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQAT CC ************************************************** CC SEQRES LDVEAGEEAGLACRVKHSSLGGQDIILYWHHHHHH CC ATOM LDVEAGEEAGLACRVKHSSLGGQDIILYW------ CC ***************************** SQ SEQUENCE 285 AA; MW; CN; SEAQQKNYTF RCLQMSSFAN RSWSRTDSVV WLGDLQTHRW SNDSATISFT KPWSQGKLSN QQWEKLQHMF QVYRVSFTRD IQELVKMMSP KEDYPIEIQL SAGCEMYPGN ASESFLHVAF QGKYVVRFWG TSWQTVPGAP SWLDLPIKVL NADQGTSATV QMLLNDTCPL FVRGLLEAGK SDLEKQEKPV AWLSSVPSSA HGHRQLVCHV SGFYPKPVWV MWMRGDQEQQ GTHRGDFLPN ADETWYLQAT LDVEAGEEAG LACRVKHSSL GGQDIILYWH HHHHH // ID 6MJJB STANDARD; PRT; 99 AA. DT CONVERTED FROM PDB (SEQRES) 6MJJ DE Beta-2-microglobulin OS Mus musculus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.930 CC R-Factor 0.186 FT #SUB 8 8 GLN B 238 238 LEU A Protein S 4 FT #SUB 10 10 TYR B 238 238 LEU A Protein S 6 FT #SUB 10 10 TYR B 239 239 PRO A Protein S 6 FT #SUB 10 10 TYR B 240 240 ASN A Protein S 1 FT #SUB 10 10 TYR B 246 246 TYR A Protein S 4 FT #SUB 11 11 SER B 192 192 TRP A Protein A 2 FT #SUB 11 11 SER B 246 246 TYR A Protein B 2 FT #SUB 12 12 ARG B 211 211 SER A Protein A 4 FT #SUB 12 12 ARG B 212 212 GLY A Protein S 4 FT #SUB 12 12 ARG B 240 240 ASN A Protein S 7 FT #SUB 12 12 ARG B 242 242 ASP A Protein S 7 FT #SUB 12 12 ARG B 244 244 THR A Protein S 3 FT #SUB 13 13 HIS B 192 192 TRP A Protein B 4 FT #SUB 14 14 PRO B 190 190 VAL A Protein S 1 FT #SUB 14 14 PRO B 192 192 TRP A Protein A 11 FT #SUB 15 15 PRO B 192 192 TRP A Protein S 3 FT #SUB 24 24 ASN B 240 240 ASN A Protein S 1 FT #SUB 26 26 TYR B 238 238 LEU A Protein S 1 FT #SUB 26 26 TYR B 239 239 PRO A Protein S 9 FT #SUB 33 33 PRO B 17 17 SER A Protein S 1 FT #SUB 33 33 PRO B 97 97 GLU A Protein S 5 FT #SUB 53 53 ASP B 29 29 VAL A Protein S 1 FT #SUB 53 53 ASP B 36 36 GLN A Protein S 4 FT #SUB 53 53 ASP B 39 39 ARG A Protein S 9 FT #SUB 54 54 MET B 15 15 MET A Protein B 2 FT #SUB 54 54 MET B 29 29 VAL A Protein B 1 FT #SUB 55 55 SER B 13 13 LEU A Protein S 1 FT #SUB 55 55 SER B 29 29 VAL A Protein S 2 FT #SUB 55 55 SER B 31 31 TRP A Protein S 2 FT #SUB 56 56 PHE B 13 13 LEU A Protein A 4 FT #SUB 56 56 PHE B 14 14 GLN A Protein S 2 FT #SUB 56 56 PHE B 15 15 MET A Protein S 2 FT #SUB 56 56 PHE B 99 99 GLN A Protein S 6 FT #SUB 56 56 PHE B 100 100 LEU A Protein S 1 FT #SUB 60 60 TRP B 99 99 GLN A Protein A 8 FT #SUB 60 60 TRP B 101 101 SER A Protein S 1 FT #SUB 60 60 TRP B 117 117 HIS A Protein S 1 FT #SUB 60 60 TRP B 119 119 ALA A Protein S 5 FT #SUB 60 60 TRP B 122 122 GLY A Protein S 1 FT #SUB 60 60 TRP B 124 124 TYR A Protein S 1 FT #SUB 62 62 PHE B 15 15 MET A Protein S 3 FT #SUB 62 62 PHE B 97 97 GLU A Protein S 1 FT #SUB 62 62 PHE B 99 99 GLN A Protein S 4 FT #SUB 63 63 TYR B 31 31 TRP A Protein S 1 FT #SUB 65 65 LEU B 239 239 PRO A Protein S 2 FT #SUB 65 65 LEU B 240 240 ASN A Protein S 2 FT #SUB 65 65 LEU B 241 241 ALA A Protein S 2 FT #SUB 67 67 HIS B 241 241 ALA A Protein S 5 FT #SUB 97 97 ARG B 194 194 SER A Protein B 1 FT #SUB 97 97 ARG B 209 209 HIS A Protein B 2 FT #SUB 98 98 ASP B 194 194 SER A Protein B 7 FT #SUB 98 98 ASP B 195 195 SER A Protein A 4 FT #SUB 98 98 ASP B 196 196 VAL A Protein A 3 FT #SUB 98 98 ASP B 207 207 VAL A Protein B 1 FT #SUB 99 99 MET B 196 196 VAL A Protein A 3 FT #SUB 99 99 MET B 207 207 VAL A Protein B 1 FT #SUB 99 99 MET B 209 209 HIS A Protein B 3 FT #SUB 99 99 MET B 248 248 GLN A Protein B 3 FT #HET 31 31 HIS B 26 103 GOL B S 14 FT #HET 32 32 PRO B 26 103 GOL B A 3 FT #HET 52 52 SER B 25 102 GOL B S 3 FT #HET 58 58 LYS B 24 101 GOL B B 5 FT #HET 60 60 TRP B 24 101 GOL B S 8 FT #HET 60 60 TRP B 26 103 GOL B B 3 FT #HET 61 61 SER B 26 103 GOL B B 2 FT #HET 62 62 PHE B 26 103 GOL B S 5 FT #HET 63 63 TYR B 25 102 GOL B S 2 FT #HET 65 65 LEU B 25 102 GOL B S 3 FT DISORDER 1 2 CC SEQUENCE 97 AA (ATOM); CC KTPQIQVYSR HPPENGKPNI LNCYVTQFHP PHIEIQMLKN GKKIPKVEMS DMSFSKDWSF CC YILAHTEFTP TETDTYACRV KHASMAEPKT VYWDRDM CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVE CC ATOM --KTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVE CC ************************************************ CC SEQRES MSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM CC ATOM MSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM CC ************************************************* SQ SEQUENCE 99 AA; MW; CN; IQKTPQIQVY SRHPPENGKP NILNCYVTQF HPPHIEIQML KNGKKIPKVE MSDMSFSKDW SFYILAHTEF TPTETDTYAC RVKHASMAEP KTVYWDRDM //