ID 4DVWA STANDARD; PRT; 353 AA. DT CONVERTED FROM PDB (SEQRES) 4DVW DE clade A/E 93TH057 HIV-1 gp120 core OS Human immunodeficiency virus 1 CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.200 CC R-Factor 0.187 FT #SUB 160 276 ASN A 18 61 HIS B Protein S 2 FT #SUB 162 278 THR A 18 61 HIS B Protein S 3 FT #SUB 162 278 THR A 19 62 GLU B Protein S 2 FT #SUB 222 354 ASN A 95 211 ASP B Protein S 4 FT #SUB 222 354 ASN A 96 212 PRO B Protein S 4 FT #SUB 222 354 ASN A 97 213 ILE B Protein S 2 FT #SUB 222 354 ASN A 98 214 PRO B Protein S 1 FT #SUB 222 354 ASN A 136 252 LYS B Protein A 7 FT #SUB 322 461 ASN A 246 379 ARG B Protein B 4 FT #SUB 323 462 ASN A 246 379 ARG B Protein A 8 FT #SUB 323 462 ASN A 300 439 ILE B Protein S 3 FT #SUB 323 462 ASN A 303 442 LYS B Protein A 2 FT #SUB 323 462 ASN A 304 443 ILE B Protein B 2 FT #SUB 323 462 ASN A 305 444 ASN B Protein B 5 FT #SUB 324 463 THR A 246 379 ARG B Protein B 7 FT #SUB 324 463 THR A 303 442 LYS B Protein S 1 FT #SUB 324 463 THR A 305 444 ASN B Protein B 4 FT #SUB 325 464 SER A 246 379 ARG B Protein A 4 FT #SUB 325 464 SER A 305 444 ASN B Protein A 6 FT #SUB 325 464 SER A 306 445 CYS B Protein S 2 FT #SUB 325 464 SER A 307 446 VAL B Protein S 8 FT #HET 9 52 LEU A 11 511 EPE A B 4 FT #HET 11 54 CYS A 11 511 EPE A S 1 FT #HET 29 72 HIS A 11 511 EPE A B 1 FT #HET 30 73 ALA A 11 511 EPE A B 2 FT #HET 60 103 GLN A 11 511 EPE A A 8 FT #HET 64 107 ASP A 11 511 EPE A S 15 FT #HET 101 217 TYR A 11 511 EPE A S 2 FT #HET 115 231 LYS A 2 502 NAG A S 7 FT #HET 120 236 THR A 1 501 NAG A A 4 FT #HET 122 238 PRO A 1 501 NAG A S 1 FT #HET 124 240 LYS A 2 502 NAG A S 1 FT #HET 136 252 LYS A 10 510 NAG A S 3 FT #HET 139 255 VAL A 12 512 0M4 A A 7 FT #HET 140 256 SER A 12 512 0M4 A B 4 FT #HET 141 257 THR A 12 512 0M4 A A 4 FT #HET 145 261 LEU A 3 503 NAG A S 1 FT #HET 146 262 ASN A 10 510 NAG A S 2 FT #HET 152 268 GLU A 5 505 NAG A B 4 FT #HET 153 269 GLU A 5 505 NAG A A 9 FT #HET 154 270 ILE A 5 505 NAG A A 9 FT #HET 156 272 ILE A 1 501 NAG A B 1 FT #HET 158 274 SER A 1 501 NAG A B 2 FT #HET 162 278 THR A 4 504 NAG A A 6 FT #HET 163 279 ASN A 4 504 NAG A A 5 FT #HET 175 291 SER A 10 510 NAG A S 4 FT #HET 198 330 TYR A 6 506 NAG A S 1 FT #HET 200 332 GLU A 6 506 NAG A S 4 FT #HET 204 336 THR A 7 507 NAG A S 3 FT #HET 205 337 LYS A 7 507 NAG A A 11 FT #HET 216 348 LYS A 5 505 NAG A S 1 FT #HET 218 350 LYS A 8 508 NAG A B 1 FT #HET 219 351 GLU A 8 508 NAG A B 1 FT #HET 220 352 HIS A 1 501 NAG A S 2 FT #HET 222 354 ASN A 8 508 NAG A A 8 FT #HET 222 354 ASN A 15 503 NAG B B 3 FT #HET 223 355 ASN A 15 503 NAG B B 3 FT #HET 223 355 ASN A 22 510 NAG B S 1 FT #HET 224 357 LYS A 15 503 NAG B A 4 FT #HET 235 368 ASP A 12 512 0M4 A S 13 FT #HET 237 370 GLU A 12 512 0M4 A S 9 FT #HET 238 371 ILE A 12 512 0M4 A S 7 FT #HET 239 372 THR A 9 509 NAG A S 1 FT #HET 240 373 MET A 9 509 NAG A S 1 FT #HET 242 375 SER A 12 512 0M4 A A 7 FT #HET 243 376 PHE A 12 512 0M4 A B 4 FT #HET 244 377 ASN A 3 503 NAG A B 1 FT #HET 244 377 ASN A 12 512 0M4 A B 1 FT #HET 249 382 PHE A 12 512 0M4 A S 7 FT #HET 255 388 THR A 9 509 NAG A S 3 FT #HET 285 424 ILE A 12 512 0M4 A S 4 FT #HET 286 425 ASN A 12 512 0M4 A A 15 FT #HET 287 426 MET A 12 512 0M4 A B 7 FT #HET 288 427 TRP A 12 512 0M4 A A 14 FT #HET 306 445 CYS A 3 503 NAG A S 2 FT #HET 307 446 VAL A 3 503 NAG A B 5 FT #HET 307 446 VAL A 6 506 NAG A S 1 FT #HET 308 447 SER A 3 503 NAG A S 7 FT #HET 325 464 SER A 15 503 NAG B S 1 FT #HET 333 472 GLY A 12 512 0M4 A B 3 FT #HET 334 473 GLY A 12 512 0M4 A B 17 FT #HET 335 474 ASN A 12 512 0M4 A B 1 FT #MOD 118 234 ASN A 1 501 NAG A S FT #MOD 125 241 ASN A 2 502 NAG A S FT #MOD 146 262 ASN A 3 503 NAG A S FT #MOD 160 276 ASN A 4 504 NAG A S FT #MOD 173 289 ASN A 5 505 NAG A S FT #MOD 179 295 ASN A 6 506 NAG A S FT #MOD 202 334 ASN A 7 507 NAG A S FT #MOD 223 355 ASN A 8 508 NAG A S FT #MOD 253 386 ASN A 9 509 NAG A S FT #MOD 309 448 ASN A 10 510 NAG A S FT DISORDER 186 191 FT DISORDER 264 271 CC SEQUENCE 339 AA (ATOM); CC VWKDADTTLF CASDAKAHET EVHNVWATHA CVPTDPNPQE IHLENVTENF NMWKNNMVEQ CC MQEDVISLWD QSLQPCVKLT GGSVIKQACP KISFDPIPIH YCTPAGYVIL KCNDKNFNGT CC GPCKNVSSVQ CTHGIKPVVS TQLLLNGSLA EEEIIIRSEN LTNNAKTIIV HLNKSVEINC CC TRPSNGDIRK AYCEINGTKW NKVLKQVTEK LKEHFNNKTI IFQPPSGGDL EITMHSFNCR CC GEFFYCNTTQ LFNNTCINGT ITLPCKIKQI INMWQGTGQA MYAPPIDGKI NCVSNITGIL CC LTRDGGANNT SNETFRPGGG NIKDNWRSEL YKYKVVQIE CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENF CC ATOM VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENF CC ************************************************** CC SEQRES NMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIH CC ATOM NMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIH CC ************************************************** CC SEQRES YCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLA CC ATOM YCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLA CC ************************************************** CC SEQRES EEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCE CC ATOM EEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSN------GDIRKAYCE CC *********************************** ********* CC SEQRES INGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFF CC ATOM INGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFF CC ************************************************** CC SEQRES YCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPI CC ATOM YCNTTQLFNNTCI--------NGTITLPCKIKQIINMWQGTGQAMYAPPI CC ************* ***************************** CC SEQRES DGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVV CC ATOM DGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVV CC ************************************************** CC SEQRES QIE CC ATOM QIE CC *** SQ SEQUENCE 353 AA; MW; CN; VWKDADTTLF CASDAKAHET EVHNVWATHA CVPTDPNPQE IHLENVTENF NMWKNNMVEQ MQEDVISLWD QSLQPCVKLT GGSVIKQACP KISFDPIPIH YCTPAGYVIL KCNDKNFNGT GPCKNVSSVQ CTHGIKPVVS TQLLLNGSLA EEEIIIRSEN LTNNAKTIIV HLNKSVEINC TRPSNGGSGS GGDIRKAYCE INGTKWNKVL KQVTEKLKEH FNNKTIIFQP PSGGDLEITM HSFNCRGEFF YCNTTQLFNN TCIGNETMKG CNGTITLPCK IKQIINMWQG TGQAMYAPPI DGKINCVSNI TGILLTRDGG ANNTSNETFR PGGGNIKDNW RSELYKYKVV QIE // ID 4DVWB STANDARD; PRT; 353 AA. DT CONVERTED FROM PDB (SEQRES) 4DVW DE clade A/E 93TH057 HIV-1 gp120 core OS Human immunodeficiency virus 1 CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.200 CC R-Factor 0.187 FT #SUB 18 61 HIS B 160 276 ASN A Protein S 2 FT #SUB 18 61 HIS B 162 278 THR A Protein S 3 FT #SUB 19 62 GLU B 162 278 THR A Protein S 2 FT #SUB 95 211 ASP B 222 354 ASN A Protein S 4 FT #SUB 96 212 PRO B 222 354 ASN A Protein B 4 FT #SUB 97 213 ILE B 222 354 ASN A Protein A 2 FT #SUB 98 214 PRO B 222 354 ASN A Protein S 1 FT #SUB 136 252 LYS B 222 354 ASN A Protein S 7 FT #SUB 246 379 ARG B 322 461 ASN A Protein S 4 FT #SUB 246 379 ARG B 323 462 ASN A Protein S 8 FT #SUB 246 379 ARG B 324 463 THR A Protein S 7 FT #SUB 246 379 ARG B 325 464 SER A Protein S 4 FT #SUB 300 439 ILE B 323 462 ASN A Protein S 3 FT #SUB 303 442 LYS B 323 462 ASN A Protein B 2 FT #SUB 303 442 LYS B 324 463 THR A Protein S 1 FT #SUB 304 443 ILE B 323 462 ASN A Protein B 2 FT #SUB 305 444 ASN B 323 462 ASN A Protein B 5 FT #SUB 305 444 ASN B 324 463 THR A Protein A 4 FT #SUB 305 444 ASN B 325 464 SER A Protein A 6 FT #SUB 306 445 CYS B 325 464 SER A Protein B 2 FT #SUB 307 446 VAL B 325 464 SER A Protein A 8 FT #HET 9 52 LEU B 23 511 EPE B B 5 FT #HET 11 54 CYS B 23 511 EPE B S 1 FT #HET 18 61 HIS B 4 504 NAG A S 16 FT #HET 29 72 HIS B 23 511 EPE B B 1 FT #HET 30 73 ALA B 23 511 EPE B B 2 FT #HET 60 103 GLN B 23 511 EPE B A 8 FT #HET 64 107 ASP B 23 511 EPE B S 13 FT #HET 98 214 PRO B 8 508 NAG A S 3 FT #HET 101 217 TYR B 23 511 EPE B S 2 FT #HET 114 230 ASP B 14 502 NAG B A 8 FT #HET 115 231 LYS B 14 502 NAG B B 1 FT #HET 120 236 THR B 13 501 NAG B B 3 FT #HET 136 252 LYS B 8 508 NAG A S 2 FT #HET 136 252 LYS B 15 503 NAG B S 1 FT #HET 139 255 VAL B 24 512 0M4 B A 5 FT #HET 140 256 SER B 24 512 0M4 B B 3 FT #HET 141 257 THR B 24 512 0M4 B A 3 FT #HET 145 261 LEU B 15 503 NAG B S 1 FT #HET 146 262 ASN B 22 510 NAG B S 2 FT #HET 152 268 GLU B 17 505 NAG B B 4 FT #HET 153 269 GLU B 17 505 NAG B A 4 FT #HET 154 270 ILE B 17 505 NAG B A 8 FT #HET 156 272 ILE B 13 501 NAG B B 1 FT #HET 158 274 SER B 13 501 NAG B B 2 FT #HET 161 277 LEU B 13 501 NAG B S 2 FT #HET 162 278 THR B 16 504 NAG B A 6 FT #HET 163 279 ASN B 16 504 NAG B A 10 FT #HET 181 297 THR B 18 506 NAG B S 1 FT #HET 198 330 TYR B 18 506 NAG B S 1 FT #HET 200 332 GLU B 18 506 NAG B S 5 FT #HET 204 336 THR B 19 507 NAG B S 2 FT #HET 205 337 LYS B 19 507 NAG B A 9 FT #HET 212 344 GLN B 17 505 NAG B S 2 FT #HET 216 348 LYS B 17 505 NAG B S 1 FT #HET 220 352 HIS B 13 501 NAG B S 2 FT #HET 235 368 ASP B 24 512 0M4 B A 13 FT #HET 237 370 GLU B 24 512 0M4 B S 6 FT #HET 238 371 ILE B 24 512 0M4 B S 8 FT #HET 239 372 THR B 21 509 NAG B S 1 FT #HET 242 375 SER B 24 512 0M4 B A 7 FT #HET 243 376 PHE B 24 512 0M4 B B 4 FT #HET 244 377 ASN B 15 503 NAG B B 1 FT #HET 244 377 ASN B 24 512 0M4 B B 1 FT #HET 246 379 ARG B 15 503 NAG B S 2 FT #HET 249 382 PHE B 24 512 0M4 B S 4 FT #HET 255 388 THR B 21 509 NAG B S 7 FT #HET 285 424 ILE B 24 512 0M4 B S 2 FT #HET 286 425 ASN B 24 512 0M4 B A 16 FT #HET 287 426 MET B 24 512 0M4 B B 11 FT #HET 288 427 TRP B 24 512 0M4 B A 18 FT #HET 305 444 ASN B 18 506 NAG B S 1 FT #HET 306 445 CYS B 15 503 NAG B S 2 FT #HET 307 446 VAL B 15 503 NAG B B 4 FT #HET 308 447 SER B 15 503 NAG B S 7 FT #HET 333 472 GLY B 24 512 0M4 B B 1 FT #HET 334 473 GLY B 24 512 0M4 B B 12 FT #HET 335 474 ASN B 24 512 0M4 B B 1 FT #MOD 118 234 ASN B 13 501 NAG B S FT #MOD 125 241 ASN B 14 502 NAG B S FT #MOD 146 262 ASN B 15 503 NAG B S FT #MOD 160 276 ASN B 16 504 NAG B S FT #MOD 173 289 ASN B 17 505 NAG B S FT #MOD 179 295 ASN B 18 506 NAG B S FT #MOD 202 334 ASN B 19 507 NAG B S FT #MOD 223 355 ASN B 20 508 NAG B S FT #MOD 253 386 ASN B 21 509 NAG B S FT #MOD 309 448 ASN B 22 510 NAG B S FT DISORDER 186 191 FT DISORDER 264 271 CC SEQUENCE 339 AA (ATOM); CC VWKDADTTLF CASDAKAHET EVHNVWATHA CVPTDPNPQE IHLENVTENF NMWKNNMVEQ CC MQEDVISLWD QSLQPCVKLT GGSVIKQACP KISFDPIPIH YCTPAGYVIL KCNDKNFNGT CC GPCKNVSSVQ CTHGIKPVVS TQLLLNGSLA EEEIIIRSEN LTNNAKTIIV HLNKSVEINC CC TRPSNGDIRK AYCEINGTKW NKVLKQVTEK LKEHFNNKTI IFQPPSGGDL EITMHSFNCR CC GEFFYCNTTQ LFNNTCINGT ITLPCKIKQI INMWQGTGQA MYAPPIDGKI NCVSNITGIL CC LTRDGGANNT SNETFRPGGG NIKDNWRSEL YKYKVVQIE CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENF CC ATOM VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENF CC ************************************************** CC SEQRES NMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIH CC ATOM NMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIH CC ************************************************** CC SEQRES YCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLA CC ATOM YCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLA CC ************************************************** CC SEQRES EEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCE CC ATOM EEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSN------GDIRKAYCE CC *********************************** ********* CC SEQRES INGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFF CC ATOM INGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFF CC ************************************************** CC SEQRES YCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPI CC ATOM YCNTTQLFNNTCI--------NGTITLPCKIKQIINMWQGTGQAMYAPPI CC ************* ***************************** CC SEQRES DGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVV CC ATOM DGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVV CC ************************************************** CC SEQRES QIE CC ATOM QIE CC *** SQ SEQUENCE 353 AA; MW; CN; VWKDADTTLF CASDAKAHET EVHNVWATHA CVPTDPNPQE IHLENVTENF NMWKNNMVEQ MQEDVISLWD QSLQPCVKLT GGSVIKQACP KISFDPIPIH YCTPAGYVIL KCNDKNFNGT GPCKNVSSVQ CTHGIKPVVS TQLLLNGSLA EEEIIIRSEN LTNNAKTIIV HLNKSVEINC TRPSNGGSGS GGDIRKAYCE INGTKWNKVL KQVTEKLKEH FNNKTIIFQP PSGGDLEITM HSFNCRGEFF YCNTTQLFNN TCIGNETMKG CNGTITLPCK IKQIINMWQG TGQAMYAPPI DGKINCVSNI TGILLTRDGG ANNTSNETFR PGGGNIKDNW RSELYKYKVV QIE //