ID 4DKQA STANDARD; PRT; 353 AA. DT CONVERTED FROM PDB (SEQRES) 4DKQ DE clade A/E 93TH057 HIV-1 gp120 core OS HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.890 CC R-Factor 0.194 FT #HET 9 52 LEU A 12 612 EPE A B 4 FT #HET 11 54 CYS A 12 612 EPE A S 2 FT #HET 29 72 HIS A 12 612 EPE A B 1 FT #HET 30 73 ALA A 12 612 EPE A B 2 FT #HET 60 103 GLN A 12 612 EPE A A 7 FT #HET 64 107 ASP A 12 612 EPE A S 15 FT #HET 96 212 PRO A 3 603 NAG A S 1 FT #HET 101 217 TYR A 12 612 EPE A S 2 FT #HET 113 229 ASN A 2 602 NAG A S 4 FT #HET 120 236 THR A 1 601 NAG A B 4 FT #HET 139 255 VAL A 13 613 0LK A A 4 FT #HET 140 256 SER A 13 613 0LK A B 3 FT #HET 141 257 THR A 13 613 0LK A A 4 FT #HET 145 261 LEU A 3 603 NAG A S 1 FT #HET 146 262 ASN A 11 611 NAG A S 2 FT #HET 152 268 GLU A 5 605 NAG A B 4 FT #HET 153 269 GLU A 5 605 NAG A A 6 FT #HET 154 270 ILE A 5 605 NAG A A 8 FT #HET 156 272 ILE A 1 601 NAG A B 1 FT #HET 162 278 THR A 4 604 NAG A A 5 FT #HET 163 279 ASN A 4 604 NAG A A 4 FT #HET 175 291 SER A 11 611 NAG A S 5 FT #HET 181 297 THR A 6 606 NAG A S 2 FT #HET 198 330 TYR A 6 606 NAG A S 3 FT #HET 200 332 GLU A 6 606 NAG A S 3 FT #HET 205 337 LYS A 7 607 NAG A S 6 FT #HET 212 344 GLN A 5 605 NAG A S 1 FT #HET 215 347 GLU A 8 608 NAG A S 1 FT #HET 216 348 LYS A 5 605 NAG A S 4 FT #HET 220 352 HIS A 1 601 NAG A S 1 FT #HET 235 368 ASP A 13 613 0LK A S 1 FT #HET 237 370 GLU A 13 613 0LK A S 6 FT #HET 238 371 ILE A 13 613 0LK A S 1 FT #HET 242 375 SER A 13 613 0LK A A 5 FT #HET 243 376 PHE A 13 613 0LK A B 4 FT #HET 244 377 ASN A 3 603 NAG A B 1 FT #HET 244 377 ASN A 13 613 0LK A B 1 FT #HET 246 379 ARG A 3 603 NAG A S 1 FT #HET 249 382 PHE A 13 613 0LK A S 4 FT #HET 255 388 THR A 9 609 NAG A S 3 FT #HET 255 388 THR A 10 610 NAG A S 1 FT #HET 256 389 GLN A 10 610 NAG A A 2 FT #HET 262 395 CYS A 10 610 NAG A S 1 FT #HET 273 412 GLY A 7 607 NAG A B 2 FT #HET 274 413 THR A 7 607 NAG A A 4 FT #HET 285 424 ILE A 13 613 0LK A S 2 FT #HET 286 425 ASN A 13 613 0LK A A 7 FT #HET 287 426 MET A 13 613 0LK A B 3 FT #HET 288 427 TRP A 13 613 0LK A A 13 FT #HET 290 429 GLY A 13 613 0LK A B 2 FT #HET 306 445 CYS A 3 603 NAG A S 2 FT #HET 307 446 VAL A 3 603 NAG A B 4 FT #HET 308 447 SER A 3 603 NAG A S 7 FT #HET 334 473 GLY A 13 613 0LK A B 18 FT #HET 335 474 ASN A 13 613 0LK A A 4 FT #MOD 118 234 ASN A 1 601 NAG A S FT #MOD 125 241 ASN A 2 602 NAG A S FT #MOD 146 262 ASN A 3 603 NAG A S FT #MOD 160 276 ASN A 4 604 NAG A S FT #MOD 173 289 ASN A 5 605 NAG A S FT #MOD 179 295 ASN A 6 606 NAG A S FT #MOD 202 334 ASN A 7 607 NAG A S FT #MOD 223 355 ASN A 8 608 NAG A S FT #MOD 253 386 ASN A 9 609 NAG A S FT #MOD 259 392 ASN A 10 610 NAG A S FT #MOD 309 448 ASN A 11 611 NAG A S FT DISORDER 186 191 FT DISORDER 264 271 CC SEQUENCE 339 AA (ATOM); CC VWKDADTTLF CASDAKAHET EVHNVWATHA CVPTDPNPQE IHLENVTENF NMWKNNMVEQ CC MQEDVISLWD QSLQPCVKLT GGSVIKQACP KISFDPIPIH YCTPAGYVIL KCNDKNFNGT CC GPCKNVSSVQ CTHGIKPVVS TQLLLNGSLA EEEIIIRSEN LTNNAKTIIV HLNKSVEINC CC TRPSNGDIRK AYCEINGTKW NKVLKQVTEK LKEHFNNKTI IFQPPSGGDL EITMHSFNCR CC GEFFYCNTTQ LFNNTCINGT ITLPCKIKQI INMWQGTGQA MYAPPIDGKI NCVSNITGIL CC LTRDGGANNT SNETFRPGGG NIKDNWRSEL YKYKVVQIE CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENF CC ATOM VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENF CC ************************************************** CC SEQRES NMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIH CC ATOM NMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIH CC ************************************************** CC SEQRES YCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLA CC ATOM YCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLA CC ************************************************** CC SEQRES EEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCE CC ATOM EEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSN------GDIRKAYCE CC *********************************** ********* CC SEQRES INGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFF CC ATOM INGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFF CC ************************************************** CC SEQRES YCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPI CC ATOM YCNTTQLFNNTCI--------NGTITLPCKIKQIINMWQGTGQAMYAPPI CC ************* ***************************** CC SEQRES DGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVV CC ATOM DGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVV CC ************************************************** CC SEQRES QIE CC ATOM QIE CC *** SQ SEQUENCE 353 AA; MW; CN; VWKDADTTLF CASDAKAHET EVHNVWATHA CVPTDPNPQE IHLENVTENF NMWKNNMVEQ MQEDVISLWD QSLQPCVKLT GGSVIKQACP KISFDPIPIH YCTPAGYVIL KCNDKNFNGT GPCKNVSSVQ CTHGIKPVVS TQLLLNGSLA EEEIIIRSEN LTNNAKTIIV HLNKSVEINC TRPSNGGSGS GGDIRKAYCE INGTKWNKVL KQVTEKLKEH FNNKTIIFQP PSGGDLEITM HSFNCRGEFF YCNTTQLFNN TCIGNETMKG CNGTITLPCK IKQIINMWQG TGQAMYAPPI DGKINCVSNI TGILLTRDGG ANNTSNETFR PGGGNIKDNW RSELYKYKVV QIE //