ID 3VQSA STANDARD; PRT; 578 AA. DT CONVERTED FROM PDB (SEQRES) 3VQS DE RNA-directed RNA polymerase OS Hepatitis C virus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.900 CC R-Factor 0.172 FT #SUB 184 184 GLN A 531 531 LYS C Protein S 2 FT #SUB 189 189 SER A 532 532 THR C Protein A 2 FT #SUB 194 194 GLN A 531 531 LYS C Protein S 6 FT #SUB 202 202 GLU A 502 502 HIS C Protein S 9 FT #SUB 202 202 GLU A 505 505 ARG C Protein S 6 FT #SUB 206 206 ASN A 505 505 ARG C Protein S 4 FT #SUB 206 206 ASN A 506 506 SER C Protein S 3 FT #SUB 206 206 ASN A 509 509 ALA C Protein B 1 FT #SUB 209 209 LYS A 506 506 SER C Protein S 1 FT #SUB 209 209 LYS A 509 509 ALA C Protein B 1 FT #SUB 209 209 LYS A 513 513 SER C Protein B 2 FT #SUB 210 210 SER A 509 509 ALA C Protein A 3 FT #SUB 210 210 SER A 512 512 LEU C Protein B 1 FT #SUB 210 210 SER A 513 513 SER C Protein B 5 FT #SUB 211 211 LYS A 513 513 SER C Protein B 2 FT #SUB 212 212 LYS A 512 512 LEU C Protein S 1 FT #SUB 212 212 LYS A 513 513 SER C Protein A 5 FT #SUB 212 212 LYS A 515 515 GLY C Protein S 1 FT #SUB 538 538 PRO A 498 498 ARG C Protein S 2 FT #SUB 502 502 HIS A 202 202 GLU D Protein A 8 FT #SUB 505 505 ARG A 202 202 GLU D Protein S 6 FT #SUB 505 505 ARG A 206 206 ASN D Protein A 4 FT #SUB 506 506 SER A 206 206 ASN D Protein A 3 FT #SUB 509 509 ALA A 206 206 ASN D Protein S 1 FT #SUB 509 509 ALA A 209 209 LYS D Protein B 2 FT #SUB 509 509 ALA A 210 210 SER D Protein A 6 FT #SUB 512 512 LEU A 210 210 SER D Protein B 1 FT #SUB 512 512 LEU A 212 212 LYS D Protein B 1 FT #SUB 513 513 SER A 209 209 LYS D Protein S 2 FT #SUB 513 513 SER A 210 210 SER D Protein A 5 FT #SUB 513 513 SER A 211 211 LYS D Protein S 2 FT #SUB 513 513 SER A 212 212 LYS D Protein B 3 FT #SUB 515 515 GLY A 212 212 LYS D Protein B 2 FT #SUB 531 531 LYS A 184 184 GLN D Protein S 2 FT #SUB 531 531 LYS A 194 194 GLN D Protein S 4 FT #SUB 532 532 THR A 188 188 GLY D Protein S 2 FT #SUB 532 532 THR A 189 189 SER D Protein A 6 FT #HET 179 179 VAL A 1 1000 JT1 A A 5 FT #HET 191 191 TYR A 1 1000 JT1 A S 4 FT #HET 192 192 GLY A 1 1000 JT1 A B 1 FT #HET 193 193 PHE A 1 1000 JT1 A A 25 FT #HET 195 195 TYR A 1 1000 JT1 A B 10 FT #HET 196 196 SER A 1 1000 JT1 A A 6 FT #HET 197 197 PRO A 1 1000 JT1 A A 7 FT #HET 200 200 ARG A 1 1000 JT1 A S 7 FT #HET 288 288 SER A 1 1000 JT1 A S 8 FT #HET 289 289 CYS A 1 1000 JT1 A A 3 FT #HET 316 316 ASN A 1 1000 JT1 A S 4 FT #HET 366 366 CYS A 1 1000 JT1 A S 2 FT #HET 368 368 SER A 1 1000 JT1 A S 4 FT #HET 384 384 LEU A 1 1000 JT1 A S 4 FT #HET 413 413 ILE A 1 1000 JT1 A S 1 FT #HET 414 414 MET A 1 1000 JT1 A A 7 FT #HET 415 415 TYR A 1 1000 JT1 A S 6 FT #HET 447 447 ILE A 1 1000 JT1 A A 6 FT #HET 448 448 TYR A 1 1000 JT1 A A 15 FT #HET 450 450 ALA A 1 1000 JT1 A A 2 FT #HET 452 452 TYR A 1 1000 JT1 A S 23 FT #HET 454 454 ILE A 1 1000 JT1 A S 2 FT #HET 462 462 ILE A 1 1000 JT1 A S 1 FT #HET 466 466 LEU A 1 1000 JT1 A S 6 FT #HET 547 547 LEU A 1 1000 JT1 A A 4 FT #HET 551 551 PHE A 1 1000 JT1 A S 10 FT DISORDER 554 578 CC SEQUENCE 553 AA (ATOM); CC SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL CC DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH CC SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS CC TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY CC QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS CC AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL CC ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW CC ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG CC EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP CC AASQLDLSGW FVA CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ATOM SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ************************************************** CC SEQRES KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ATOM KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ************************************************** CC SEQRES FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ATOM FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ************************************************** CC SEQRES KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ATOM KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ************************************************** CC SEQRES VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ATOM VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ************************************************** CC SEQRES QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ATOM QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ************************************************** CC SEQRES AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ATOM AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ************************************************** CC SEQRES GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ATOM GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ************************************************** CC SEQRES RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ATOM RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ************************************************** CC SEQRES CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ATOM CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ************************************************** CC SEQRES RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ATOM RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ************************************************** CC SEQRES FVAGYSGGDIYHSLSRARPRGSHHHHHH CC ATOM FVA------------------------- CC *** SQ SEQUENCE 578 AA; MW; CN; SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP AASQLDLSGW FVAGYSGGDI YHSLSRARPR GSHHHHHH // ID 3VQSB STANDARD; PRT; 578 AA. DT CONVERTED FROM PDB (SEQRES) 3VQS DE RNA-directed RNA polymerase OS Hepatitis C virus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.900 CC R-Factor 0.172 FT #SUB 307 307 LYS B 151 151 LYS C Protein S 3 FT #SUB 338 338 VAL B 149 149 PRO C Protein S 1 FT #SUB 345 345 ARG B 150 150 GLU C Protein S 1 FT #SUB 149 149 PRO B 338 338 VAL D Protein B 1 FT #SUB 150 150 GLU B 341 341 GLU D Protein S 1 FT #SUB 150 150 GLU B 345 345 ARG D Protein S 2 FT #SUB 151 151 LYS B 307 307 LYS D Protein B 2 FT #HET 92 92 THR B 3 602 CL B S 1 FT #HET 93 93 PRO B 3 602 CL B S 1 FT #HET 96 96 SER B 3 602 CL B S 2 FT #HET 168 168 ARG B 3 602 CL B S 5 FT #HET 172 172 LYS B 3 602 CL B S 1 FT #HET 179 179 VAL B 2 601 JT1 B A 4 FT #HET 191 191 TYR B 2 601 JT1 B S 3 FT #HET 192 192 GLY B 2 601 JT1 B B 1 FT #HET 193 193 PHE B 2 601 JT1 B A 20 FT #HET 195 195 TYR B 2 601 JT1 B B 9 FT #HET 196 196 SER B 2 601 JT1 B A 6 FT #HET 197 197 PRO B 2 601 JT1 B A 7 FT #HET 200 200 ARG B 2 601 JT1 B S 6 FT #HET 288 288 SER B 2 601 JT1 B S 6 FT #HET 289 289 CYS B 2 601 JT1 B A 3 FT #HET 316 316 ASN B 2 601 JT1 B S 3 FT #HET 366 366 CYS B 2 601 JT1 B S 2 FT #HET 368 368 SER B 2 601 JT1 B S 4 FT #HET 384 384 LEU B 2 601 JT1 B S 5 FT #HET 413 413 ILE B 2 601 JT1 B S 1 FT #HET 414 414 MET B 2 601 JT1 B A 7 FT #HET 415 415 TYR B 2 601 JT1 B S 6 FT #HET 447 447 ILE B 2 601 JT1 B A 5 FT #HET 448 448 TYR B 2 601 JT1 B A 15 FT #HET 450 450 ALA B 2 601 JT1 B S 1 FT #HET 452 452 TYR B 2 601 JT1 B S 24 FT #HET 454 454 ILE B 2 601 JT1 B S 1 FT #HET 462 462 ILE B 2 601 JT1 B S 1 FT #HET 466 466 LEU B 2 601 JT1 B S 5 FT #HET 547 547 LEU B 2 601 JT1 B S 1 FT #HET 555 555 TYR B 2 601 JT1 B S 11 FT #HET 556 556 SER B 2 601 JT1 B S 1 FT DISORDER 558 578 CC SEQUENCE 557 AA (ATOM); CC SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL CC DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH CC SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS CC TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY CC QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS CC AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL CC ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW CC ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG CC EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP CC AASQLDLSGW FVAGYSG CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ATOM SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ************************************************** CC SEQRES KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ATOM KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ************************************************** CC SEQRES FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ATOM FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ************************************************** CC SEQRES KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ATOM KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ************************************************** CC SEQRES VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ATOM VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ************************************************** CC SEQRES QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ATOM QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ************************************************** CC SEQRES AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ATOM AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ************************************************** CC SEQRES GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ATOM GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ************************************************** CC SEQRES RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ATOM RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ************************************************** CC SEQRES CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ATOM CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ************************************************** CC SEQRES RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ATOM RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ************************************************** CC SEQRES FVAGYSGGDIYHSLSRARPRGSHHHHHH CC ATOM FVAGYSG--------------------- CC ******* SQ SEQUENCE 578 AA; MW; CN; SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP AASQLDLSGW FVAGYSGGDI YHSLSRARPR GSHHHHHH // ID 3VQSC STANDARD; PRT; 578 AA. DT CONVERTED FROM PDB (SEQRES) 3VQS DE RNA-directed RNA polymerase OS Hepatitis C virus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.900 CC R-Factor 0.172 FT #SUB 498 498 ARG C 538 538 PRO A Protein S 2 FT #SUB 502 502 HIS C 202 202 GLU A Protein A 9 FT #SUB 505 505 ARG C 202 202 GLU A Protein S 6 FT #SUB 505 505 ARG C 206 206 ASN A Protein A 4 FT #SUB 506 506 SER C 206 206 ASN A Protein A 3 FT #SUB 506 506 SER C 209 209 LYS A Protein S 1 FT #SUB 509 509 ALA C 206 206 ASN A Protein S 1 FT #SUB 509 509 ALA C 209 209 LYS A Protein B 1 FT #SUB 509 509 ALA C 210 210 SER A Protein A 3 FT #SUB 512 512 LEU C 210 210 SER A Protein B 1 FT #SUB 512 512 LEU C 212 212 LYS A Protein B 1 FT #SUB 513 513 SER C 209 209 LYS A Protein S 2 FT #SUB 513 513 SER C 210 210 SER A Protein A 5 FT #SUB 513 513 SER C 211 211 LYS A Protein S 2 FT #SUB 513 513 SER C 212 212 LYS A Protein B 5 FT #SUB 515 515 GLY C 212 212 LYS A Protein B 1 FT #SUB 531 531 LYS C 184 184 GLN A Protein S 2 FT #SUB 531 531 LYS C 194 194 GLN A Protein S 6 FT #SUB 532 532 THR C 189 189 SER A Protein S 2 FT #SUB 149 149 PRO C 338 338 VAL B Protein B 1 FT #SUB 150 150 GLU C 345 345 ARG B Protein S 1 FT #SUB 151 151 LYS C 307 307 LYS B Protein B 3 FT #HET 92 92 THR C 5 602 CL C S 1 FT #HET 93 93 PRO C 5 602 CL C S 1 FT #HET 96 96 SER C 5 602 CL C S 2 FT #HET 168 168 ARG C 5 602 CL C S 3 FT #HET 172 172 LYS C 5 602 CL C S 1 FT #HET 179 179 VAL C 4 601 JT1 C A 4 FT #HET 191 191 TYR C 4 601 JT1 C S 3 FT #HET 192 192 GLY C 4 601 JT1 C B 1 FT #HET 193 193 PHE C 4 601 JT1 C A 21 FT #HET 195 195 TYR C 4 601 JT1 C B 10 FT #HET 196 196 SER C 4 601 JT1 C A 7 FT #HET 197 197 PRO C 4 601 JT1 C A 7 FT #HET 200 200 ARG C 4 601 JT1 C S 7 FT #HET 288 288 SER C 4 601 JT1 C S 6 FT #HET 289 289 CYS C 4 601 JT1 C A 4 FT #HET 316 316 ASN C 4 601 JT1 C S 3 FT #HET 366 366 CYS C 4 601 JT1 C S 2 FT #HET 368 368 SER C 4 601 JT1 C S 4 FT #HET 384 384 LEU C 4 601 JT1 C S 5 FT #HET 413 413 ILE C 4 601 JT1 C S 1 FT #HET 414 414 MET C 4 601 JT1 C A 7 FT #HET 415 415 TYR C 4 601 JT1 C S 6 FT #HET 447 447 ILE C 4 601 JT1 C A 4 FT #HET 448 448 TYR C 4 601 JT1 C A 15 FT #HET 450 450 ALA C 4 601 JT1 C S 2 FT #HET 452 452 TYR C 4 601 JT1 C S 24 FT #HET 454 454 ILE C 4 601 JT1 C S 1 FT #HET 462 462 ILE C 4 601 JT1 C S 1 FT #HET 466 466 LEU C 4 601 JT1 C S 4 FT #HET 547 547 LEU C 4 601 JT1 C S 2 FT #HET 555 555 TYR C 4 601 JT1 C S 9 FT #HET 556 556 SER C 4 601 JT1 C S 2 FT DISORDER 557 578 CC SEQUENCE 556 AA (ATOM); CC SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL CC DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH CC SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS CC TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY CC QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS CC AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL CC ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW CC ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG CC EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP CC AASQLDLSGW FVAGYS CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ATOM SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ************************************************** CC SEQRES KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ATOM KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ************************************************** CC SEQRES FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ATOM FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ************************************************** CC SEQRES KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ATOM KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ************************************************** CC SEQRES VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ATOM VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ************************************************** CC SEQRES QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ATOM QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ************************************************** CC SEQRES AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ATOM AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ************************************************** CC SEQRES GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ATOM GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ************************************************** CC SEQRES RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ATOM RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ************************************************** CC SEQRES CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ATOM CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ************************************************** CC SEQRES RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ATOM RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ************************************************** CC SEQRES FVAGYSGGDIYHSLSRARPRGSHHHHHH CC ATOM FVAGYS---------------------- CC ****** SQ SEQUENCE 578 AA; MW; CN; SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP AASQLDLSGW FVAGYSGGDI YHSLSRARPR GSHHHHHH // ID 3VQSD STANDARD; PRT; 578 AA. DT CONVERTED FROM PDB (SEQRES) 3VQS DE RNA-directed RNA polymerase OS Hepatitis C virus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.900 CC R-Factor 0.172 FT #SUB 184 184 GLN D 531 531 LYS A Protein S 2 FT #SUB 188 188 GLY D 532 532 THR A Protein B 2 FT #SUB 189 189 SER D 532 532 THR A Protein A 6 FT #SUB 194 194 GLN D 531 531 LYS A Protein S 4 FT #SUB 202 202 GLU D 502 502 HIS A Protein S 8 FT #SUB 202 202 GLU D 505 505 ARG A Protein S 6 FT #SUB 206 206 ASN D 505 505 ARG A Protein S 4 FT #SUB 206 206 ASN D 506 506 SER A Protein S 3 FT #SUB 206 206 ASN D 509 509 ALA A Protein B 1 FT #SUB 209 209 LYS D 509 509 ALA A Protein B 2 FT #SUB 209 209 LYS D 513 513 SER A Protein B 2 FT #SUB 210 210 SER D 509 509 ALA A Protein A 6 FT #SUB 210 210 SER D 512 512 LEU A Protein B 1 FT #SUB 210 210 SER D 513 513 SER A Protein B 5 FT #SUB 211 211 LYS D 513 513 SER A Protein B 2 FT #SUB 212 212 LYS D 512 512 LEU A Protein S 1 FT #SUB 212 212 LYS D 513 513 SER A Protein A 3 FT #SUB 212 212 LYS D 515 515 GLY A Protein S 2 FT #SUB 307 307 LYS D 151 151 LYS B Protein S 2 FT #SUB 338 338 VAL D 149 149 PRO B Protein S 1 FT #SUB 341 341 GLU D 150 150 GLU B Protein S 1 FT #SUB 345 345 ARG D 150 150 GLU B Protein S 2 FT #HET 179 179 VAL D 6 1000 JT1 D A 4 FT #HET 191 191 TYR D 6 1000 JT1 D S 4 FT #HET 192 192 GLY D 6 1000 JT1 D B 1 FT #HET 193 193 PHE D 6 1000 JT1 D A 26 FT #HET 195 195 TYR D 6 1000 JT1 D B 10 FT #HET 196 196 SER D 6 1000 JT1 D A 6 FT #HET 197 197 PRO D 6 1000 JT1 D A 7 FT #HET 200 200 ARG D 6 1000 JT1 D S 7 FT #HET 288 288 SER D 6 1000 JT1 D S 8 FT #HET 289 289 CYS D 6 1000 JT1 D A 3 FT #HET 316 316 ASN D 6 1000 JT1 D S 4 FT #HET 366 366 CYS D 6 1000 JT1 D S 3 FT #HET 368 368 SER D 6 1000 JT1 D S 4 FT #HET 384 384 LEU D 6 1000 JT1 D S 4 FT #HET 413 413 ILE D 6 1000 JT1 D S 1 FT #HET 414 414 MET D 6 1000 JT1 D A 7 FT #HET 415 415 TYR D 6 1000 JT1 D S 6 FT #HET 447 447 ILE D 6 1000 JT1 D A 4 FT #HET 448 448 TYR D 6 1000 JT1 D A 13 FT #HET 450 450 ALA D 6 1000 JT1 D S 2 FT #HET 452 452 TYR D 6 1000 JT1 D S 22 FT #HET 454 454 ILE D 6 1000 JT1 D S 1 FT #HET 462 462 ILE D 6 1000 JT1 D S 1 FT #HET 466 466 LEU D 6 1000 JT1 D S 5 FT #HET 547 547 LEU D 6 1000 JT1 D A 6 FT #HET 551 551 PHE D 6 1000 JT1 D S 8 FT DISORDER 554 578 CC SEQUENCE 553 AA (ATOM); CC SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL CC DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH CC SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS CC TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY CC QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS CC AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL CC ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW CC ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG CC EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP CC AASQLDLSGW FVA CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ATOM SMSYTWTGALITPCAAEESKLPINALSNSLLRHHNMVYATTSRSAGLRQK CC ************************************************** CC SEQRES KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ATOM KVTFDRLQVLDDHYRDVLKEMKAKASTVKAKLLSVEEACKLTPPHSAKSK CC ************************************************** CC SEQRES FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ATOM FGYGAKDVRNLSSKAVNHIHSVWKDLLEDTVTPIDTTIMAKNEVFCVQPE CC ************************************************** CC SEQRES KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ATOM KGGRKPARLIVFPDLGVRVCEKMALYDVVSTLPQVVMGSSYGFQYSPGQR CC ************************************************** CC SEQRES VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ATOM VEFLVNTWKSKKNPMGFSYDTRCFDSTVTENDIRVEESIYQCCDLAPEAR CC ************************************************** CC SEQRES QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ATOM QAIKSLTERLYIGGPLTNSKGQNCGYRRCRASGVLTTSCGNTLTCYLKAS CC ************************************************** CC SEQRES AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ATOM AACRAAKLQDCTMLVNGDDLVVICESAGTQEDAASLRVFTEAMTRYSAPP CC ************************************************** CC SEQRES GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ATOM GDPPQPEYDLELITSCSSNVSVAHDASGKRVYYLTRDPTTPLARAAWETA CC ************************************************** CC SEQRES RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ATOM RHTPVNSWLGNIIMYAPTLWARMILMTHFFSILLAQEQLEKALDCQIYGA CC ************************************************** CC SEQRES CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ATOM CYSIEPLDLPQIIERLHGLSAFSLHSYSPGEINRVASCLRKLGVPPLRVW CC ************************************************** CC SEQRES RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ATOM RHRARSVRARLLSQGGRAATCGKYLFNWAVKTKLKLTPIPAASQLDLSGW CC ************************************************** CC SEQRES FVAGYSGGDIYHSLSRARPRGSHHHHHH CC ATOM FVA------------------------- CC *** SQ SEQUENCE 578 AA; MW; CN; SMSYTWTGAL ITPCAAEESK LPINALSNSL LRHHNMVYAT TSRSAGLRQK KVTFDRLQVL DDHYRDVLKE MKAKASTVKA KLLSVEEACK LTPPHSAKSK FGYGAKDVRN LSSKAVNHIH SVWKDLLEDT VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVC EKMALYDVVS TLPQVVMGSS YGFQYSPGQR VEFLVNTWKS KKNPMGFSYD TRCFDSTVTE NDIRVEESIY QCCDLAPEAR QAIKSLTERL YIGGPLTNSK GQNCGYRRCR ASGVLTTSCG NTLTCYLKAS AACRAAKLQD CTMLVNGDDL VVICESAGTQ EDAASLRVFT EAMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDASGKR VYYLTRDPTT PLARAAWETA RHTPVNSWLG NIIMYAPTLW ARMILMTHFF SILLAQEQLE KALDCQIYGA CYSIEPLDLP QIIERLHGLS AFSLHSYSPG EINRVASCLR KLGVPPLRVW RHRARSVRAR LLSQGGRAAT CGKYLFNWAV KTKLKLTPIP AASQLDLSGW FVAGYSGGDI YHSLSRARPR GSHHHHHH //