ID 3MDAA STANDARD; PRT; 325 AA. DT CONVERTED FROM PDB (SEQRES) 3MDA DE DNA polymerase lambda OS Homo sapiens CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.030 CC R-Factor 0.200 FT #SUB 24 274 TRP A 4 4 DC T DNA/RNA S 32 FT #SUB 24 274 TRP A 5 5 DG T DNA/RNA S 2 FT #SUB 27 277 LEU A 4 4 DC T DNA/RNA S 2 FT #SUB 121 371 THR A 11 11 DG T DNA/RNA S 1 FT #SUB 122 372 GLN A 10 10 DT T DNA/RNA S 2 FT #SUB 212 462 VAL A 9 9 DC T DNA/RNA S 3 FT #SUB 212 462 VAL A 10 10 DT T DNA/RNA B 2 FT #SUB 213 463 SER A 9 9 DC T DNA/RNA B 1 FT #SUB 213 463 SER A 10 10 DT T DNA/RNA B 5 FT #SUB 214 464 GLN A 9 9 DC T DNA/RNA S 5 FT #SUB 214 464 GLN A 10 10 DT T DNA/RNA A 5 FT #SUB 220 470 GLN A 9 9 DC T DNA/RNA B 2 FT #SUB 221 471 GLN A 8 8 DA T DNA/RNA S 10 FT #SUB 221 471 GLN A 9 9 DC T DNA/RNA A 5 FT #SUB 222 472 LYS A 8 8 DA T DNA/RNA S 4 FT #SUB 222 472 LYS A 9 9 DC T DNA/RNA B 1 FT #SUB 255 505 TYR A 6 6 DG T DNA/RNA S 1 FT #SUB 263 513 ASN A 5 5 DG T DNA/RNA S 1 FT #SUB 264 514 ARG A 5 5 DG T DNA/RNA A 29 FT #SUB 267 517 ARG A 5 5 DG T DNA/RNA S 13 FT #SUB 267 517 ARG A 6 6 DG T DNA/RNA S 8 FT #SUB 268 518 ALA A 5 5 DG T DNA/RNA B 1 FT #SUB 271 521 LYS A 4 4 DC T DNA/RNA S 4 FT #SUB 271 521 LYS A 6 6 DG T DNA/RNA S 6 FT #SUB 277 527 LEU A 6 6 DG T DNA/RNA B 2 FT #SUB 278 528 SER A 6 6 DG T DNA/RNA S 1 FT #SUB 278 528 SER A 7 7 DT T DNA/RNA S 2 FT #SUB 279 529 GLU A 6 6 DG T DNA/RNA S 6 FT #SUB 279 529 GLU A 7 7 DT T DNA/RNA S 4 FT #SUB 280 530 HIS A 7 7 DT T DNA/RNA S 2 FT #SUB 280 530 HIS A 8 8 DA T DNA/RNA S 4 FT #SUB 288 538 ARG A 6 6 DG T DNA/RNA S 1 FT #SUB 291 541 HIS A 3 3 DG T DNA/RNA A 6 FT #SUB 294 544 LYS A 7 7 DT T DNA/RNA S 3 FT #SUB 91 341 ILE A 5 5 DA P DNA/RNA B 1 FT #SUB 92 342 TRP A 5 5 DA P DNA/RNA A 10 FT #SUB 92 342 TRP A 6 6 DC P DNA/RNA S 2 FT #SUB 93 343 GLY A 4 4 DT P DNA/RNA B 6 FT #SUB 93 343 GLY A 5 5 DA P DNA/RNA B 4 FT #SUB 94 344 ALA A 4 4 DT P DNA/RNA B 3 FT #SUB 94 344 ALA A 5 5 DA P DNA/RNA B 3 FT #SUB 95 345 GLY A 4 4 DT P DNA/RNA B 13 FT #SUB 96 346 THR A 4 4 DT P DNA/RNA A 4 FT #SUB 97 347 LYS A 3 3 DG P DNA/RNA S 9 FT #SUB 97 347 LYS A 4 4 DT P DNA/RNA A 8 FT #SUB 98 348 THR A 3 3 DG P DNA/RNA S 1 FT #SUB 98 348 THR A 4 4 DT P DNA/RNA A 6 FT #SUB 166 416 GLY A 7 7 CAR P DNA/RNA B 1 FT #SUB 170 420 ARG A 7 7 CAR P DNA/RNA S 1 FT #SUB 177 427 ASP A 7 7 CAR P DNA/RNA S 4 FT #SUB 179 429 ASP A 6 6 DC P DNA/RNA S 1 FT #SUB 179 429 ASP A 7 7 CAR P DNA/RNA S 7 FT #SUB 224 474 LEU A 6 6 DC P DNA/RNA S 1 FT #SUB 238 488 ARG A 6 6 DC P DNA/RNA S 1 FT #SUB 240 490 ASP A 6 6 DC P DNA/RNA S 3 FT #SUB 240 490 ASP A 7 7 CAR P DNA/RNA S 1 FT #SUB 255 505 TYR A 6 6 DC P DNA/RNA S 6 FT #SUB 255 505 TYR A 7 7 CAR P DNA/RNA A 7 FT #SUB 256 506 PHE A 7 7 CAR P DNA/RNA A 8 FT #SUB 257 507 THR A 7 7 CAR P DNA/RNA B 2 FT #SUB 258 508 GLY A 7 7 CAR P DNA/RNA B 5 FT #SUB 259 509 SER A 7 7 CAR P DNA/RNA B 3 FT #SUB 260 510 ALA A 7 7 CAR P DNA/RNA A 5 FT #SUB 263 513 ASN A 7 7 CAR P DNA/RNA S 7 FT #SUB 17 267 TYR A 1 1 DG D DNA/RNA S 1 FT #SUB 24 274 TRP A 1 1 DG D DNA/RNA A 10 FT #SUB 25 275 ARG A 1 1 DG D DNA/RNA A 12 FT #SUB 28 278 GLY A 1 1 DG D DNA/RNA B 7 FT #SUB 29 279 TYR A 1 1 DG D DNA/RNA S 8 FT #SUB 53 303 PRO A 3 3 DC D DNA/RNA B 2 FT #SUB 54 304 GLY A 2 2 DC D DNA/RNA B 9 FT #SUB 54 304 GLY A 3 3 DC D DNA/RNA B 4 FT #SUB 55 305 ILE A 2 2 DC D DNA/RNA B 1 FT #SUB 55 305 ILE A 3 3 DC D DNA/RNA B 5 FT #SUB 56 306 GLY A 2 2 DC D DNA/RNA B 4 FT #SUB 58 308 ARG A 1 1 DG D DNA/RNA S 11 FT #SUB 58 308 ARG A 2 2 DC D DNA/RNA A 6 FT #SUB 59 309 MET A 1 1 DG D DNA/RNA A 5 FT #SUB 59 309 MET A 2 2 DC D DNA/RNA A 4 FT #SUB 62 312 LYS A 1 1 DG D DNA/RNA S 5 FT #HET 89 339 SER A 2 1 NA A B 2 FT #HET 91 341 ILE A 2 1 NA A B 2 FT #HET 92 342 TRP A 2 1 NA A B 1 FT #HET 93 343 GLY A 2 1 NA A B 1 FT #HET 94 344 ALA A 2 1 NA A B 3 FT #HET 136 386 ARG A 1 576 PPV A S 5 FT #HET 166 416 GLY A 1 576 PPV A B 2 FT #HET 167 417 SER A 1 576 PPV A A 9 FT #HET 170 420 ARG A 1 576 PPV A S 3 FT #HET 175 425 CYS A 1 576 PPV A B 2 FT #HET 176 426 GLY A 1 576 PPV A B 4 FT #HET 177 427 ASP A 1 576 PPV A A 4 FT #HET 177 427 ASP A 4 577 MG A S 3 FT #HET 179 429 ASP A 1 576 PPV A S 1 FT #HET 179 429 ASP A 4 577 MG A S 3 FT #HET 213 463 SER A 3 4 NA A B 2 CC SEQUENCE 325 AA (ATOM); CC AHNLHITEKL EVLAKAYSVQ GDKWRALGYA KAINALKSFH KPVTSYQEAC SIPGIGKRMA CC EKIIEILESG HLRKLDHISE SVPVLELFSN IWGAGTKTAQ MWYQQGFRSL EDIRSQASLT CC TQQAIGLKHY SDFLERMPRE EATEIEQTVQ KAAQAFNSGL LCVACGSYRR GKATCGDVDV CC LITHPDGRSH RGIFSRLLDS LRQEGFLTDD LVSQEENGQQ QKYLGVCRLP GPGRRHRRLD CC IIVVPYSEFA CALLYFTGSA HFNRSMRALA KTKGMSLSEH ALSTAVVRNT HGCKVGPGRV CC LPTPTEKDVF RLLGLPYREP AERDW CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES AHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAC CC ATOM AHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAC CC ************************************************** CC SEQRES SIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQ CC ATOM SIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQ CC ************************************************** CC SEQRES MWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ CC ATOM MWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQ CC ************************************************** CC SEQRES KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDS CC ATOM KAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDS CC ************************************************** CC SEQRES LRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFA CC ATOM LRQEGFLTDDLVSQEENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFA CC ************************************************** CC SEQRES CALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRV CC ATOM CALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRV CC ************************************************** CC SEQRES LPTPTEKDVFRLLGLPYREPAERDW CC ATOM LPTPTEKDVFRLLGLPYREPAERDW CC ************************* SQ SEQUENCE 325 AA; MW; CN; AHNLHITEKL EVLAKAYSVQ GDKWRALGYA KAINALKSFH KPVTSYQEAC SIPGIGKRMA EKIIEILESG HLRKLDHISE SVPVLELFSN IWGAGTKTAQ MWYQQGFRSL EDIRSQASLT TQQAIGLKHY SDFLERMPRE EATEIEQTVQ KAAQAFNSGL LCVACGSYRR GKATCGDVDV LITHPDGRSH RGIFSRLLDS LRQEGFLTDD LVSQEENGQQ QKYLGVCRLP GPGRRHRRLD IIVVPYSEFA CALLYFTGSA HFNRSMRALA KTKGMSLSEH ALSTAVVRNT HGCKVGPGRV LPTPTEKDVF RLLGLPYREP AERDW // ID 3MDAT STANDARD; PRT; 11 AA. DT CONVERTED FROM PDB (SEQRES) 3MDA DE DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3') OS syntetic CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.030 CC R-Factor 0.200 FT #SUB 3 3 DG T 291 541 HIS A Protein S 6 FT #SUB 4 4 DC T 24 274 TRP A Protein S 32 FT #SUB 4 4 DC T 27 277 LEU A Protein S 2 FT #SUB 4 4 DC T 271 521 LYS A Protein S 4 FT #SUB 5 5 DG T 24 274 TRP A Protein S 2 FT #SUB 5 5 DG T 263 513 ASN A Protein S 1 FT #SUB 5 5 DG T 264 514 ARG A Protein S 29 FT #SUB 5 5 DG T 267 517 ARG A Protein S 13 FT #SUB 5 5 DG T 268 518 ALA A Protein S 1 FT #SUB 6 6 DG T 255 505 TYR A Protein S 1 FT #SUB 6 6 DG T 267 517 ARG A Protein S 8 FT #SUB 6 6 DG T 271 521 LYS A Protein S 6 FT #SUB 6 6 DG T 277 527 LEU A Protein S 2 FT #SUB 6 6 DG T 278 528 SER A Protein S 1 FT #SUB 6 6 DG T 279 529 GLU A Protein S 6 FT #SUB 6 6 DG T 288 538 ARG A Protein S 1 FT #SUB 7 7 DT T 278 528 SER A Protein S 2 FT #SUB 7 7 DT T 279 529 GLU A Protein S 4 FT #SUB 7 7 DT T 280 530 HIS A Protein S 2 FT #SUB 7 7 DT T 294 544 LYS A Protein S 3 FT #SUB 8 8 DA T 221 471 GLN A Protein S 10 FT #SUB 8 8 DA T 222 472 LYS A Protein S 4 FT #SUB 8 8 DA T 280 530 HIS A Protein S 4 FT #SUB 9 9 DC T 212 462 VAL A Protein S 3 FT #SUB 9 9 DC T 213 463 SER A Protein S 1 FT #SUB 9 9 DC T 214 464 GLN A Protein S 5 FT #SUB 9 9 DC T 220 470 GLN A Protein S 2 FT #SUB 9 9 DC T 221 471 GLN A Protein S 5 FT #SUB 9 9 DC T 222 472 LYS A Protein S 1 FT #SUB 10 10 DT T 122 372 GLN A Protein S 2 FT #SUB 10 10 DT T 212 462 VAL A Protein S 2 FT #SUB 10 10 DT T 213 463 SER A Protein S 5 FT #SUB 10 10 DT T 214 464 GLN A Protein S 5 FT #SUB 11 11 DG T 121 371 THR A Protein S 1 FT #SUB 5 5 DG T 6 6 DC P DNA/RNA S 1 FT #SUB 5 5 DG T 7 7 CAR P DNA/RNA S 15 FT #SUB 6 6 DG T 5 5 DA P DNA/RNA S 3 FT #SUB 6 6 DG T 6 6 DC P DNA/RNA S 15 FT #SUB 7 7 DT T 5 5 DA P DNA/RNA S 13 FT #SUB 8 8 DA T 3 3 DG P DNA/RNA S 3 FT #SUB 8 8 DA T 4 4 DT P DNA/RNA S 12 FT #SUB 8 8 DA T 5 5 DA P DNA/RNA S 16 FT #SUB 9 9 DC T 2 2 DA P DNA/RNA S 1 FT #SUB 9 9 DC T 3 3 DG P DNA/RNA S 15 FT #SUB 10 10 DT T 1 1 DC P DNA/RNA S 1 FT #SUB 10 10 DT T 2 2 DA P DNA/RNA S 13 FT #SUB 10 10 DT T 3 3 DG P DNA/RNA S 5 FT #SUB 11 11 DG T 1 1 DC P DNA/RNA S 15 FT #SUB 11 11 DG T 2 2 DA P DNA/RNA S 6 FT #SUB 1 1 DC T 4 4 DG D DNA/RNA S 15 FT #SUB 2 2 DG T 2 2 DC D DNA/RNA S 1 FT #SUB 2 2 DG T 3 3 DC D DNA/RNA S 15 FT #SUB 2 2 DG T 4 4 DG D DNA/RNA S 11 FT #SUB 3 3 DG T 1 1 DG D DNA/RNA S 1 FT #SUB 3 3 DG T 2 2 DC D DNA/RNA S 15 FT #SUB 3 3 DG T 3 3 DC D DNA/RNA S 2 FT #SUB 4 4 DC T 1 1 DG D DNA/RNA S 14 FT #HET 10 10 DT T 3 4 NA A S 1 CC SEQUENCE 11 AA (ATOM); CC cggcggtact g CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES cggcggtactg CC ATOM cggcggtactg CC *********** SQ SEQUENCE 11 AA; MW; CN; cggcggtact g // ID 3MDAP STANDARD; PRT; 7 AA. DT CONVERTED FROM PDB (SEQRES) 3MDA DE DNA (5'-D(*CP*AP*GP*TP*AP*CP*(CAR))-3') OS syntetic CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.030 CC R-Factor 0.200 FT #SUB 3 3 DG P 97 347 LYS A Protein S 9 FT #SUB 3 3 DG P 98 348 THR A Protein S 1 FT #SUB 4 4 DT P 93 343 GLY A Protein S 6 FT #SUB 4 4 DT P 94 344 ALA A Protein S 3 FT #SUB 4 4 DT P 95 345 GLY A Protein S 13 FT #SUB 4 4 DT P 96 346 THR A Protein S 4 FT #SUB 4 4 DT P 97 347 LYS A Protein S 8 FT #SUB 4 4 DT P 98 348 THR A Protein S 6 FT #SUB 5 5 DA P 91 341 ILE A Protein S 1 FT #SUB 5 5 DA P 92 342 TRP A Protein S 10 FT #SUB 5 5 DA P 93 343 GLY A Protein S 4 FT #SUB 5 5 DA P 94 344 ALA A Protein S 3 FT #SUB 6 6 DC P 92 342 TRP A Protein S 2 FT #SUB 6 6 DC P 179 429 ASP A Protein S 1 FT #SUB 6 6 DC P 224 474 LEU A Protein S 1 FT #SUB 6 6 DC P 238 488 ARG A Protein S 1 FT #SUB 6 6 DC P 240 490 ASP A Protein S 3 FT #SUB 6 6 DC P 255 505 TYR A Protein S 6 FT #SUB 7 7 CAR P 166 416 GLY A Protein S 1 FT #SUB 7 7 CAR P 170 420 ARG A Protein S 1 FT #SUB 7 7 CAR P 177 427 ASP A Protein S 4 FT #SUB 7 7 CAR P 179 429 ASP A Protein S 7 FT #SUB 7 7 CAR P 240 490 ASP A Protein S 1 FT #SUB 7 7 CAR P 255 505 TYR A Protein S 7 FT #SUB 7 7 CAR P 256 506 PHE A Protein S 8 FT #SUB 7 7 CAR P 257 507 THR A Protein S 2 FT #SUB 7 7 CAR P 258 508 GLY A Protein S 5 FT #SUB 7 7 CAR P 259 509 SER A Protein S 3 FT #SUB 7 7 CAR P 260 510 ALA A Protein S 5 FT #SUB 7 7 CAR P 263 513 ASN A Protein S 7 FT #SUB 1 1 DC P 10 10 DT T DNA/RNA S 1 FT #SUB 1 1 DC P 11 11 DG T DNA/RNA S 15 FT #SUB 2 2 DA P 9 9 DC T DNA/RNA S 1 FT #SUB 2 2 DA P 10 10 DT T DNA/RNA S 13 FT #SUB 2 2 DA P 11 11 DG T DNA/RNA S 6 FT #SUB 3 3 DG P 8 8 DA T DNA/RNA S 3 FT #SUB 3 3 DG P 9 9 DC T DNA/RNA S 15 FT #SUB 3 3 DG P 10 10 DT T DNA/RNA S 5 FT #SUB 4 4 DT P 8 8 DA T DNA/RNA S 12 FT #SUB 5 5 DA P 6 6 DG T DNA/RNA S 3 FT #SUB 5 5 DA P 7 7 DT T DNA/RNA S 13 FT #SUB 5 5 DA P 8 8 DA T DNA/RNA S 16 FT #SUB 6 6 DC P 5 5 DG T DNA/RNA S 1 FT #SUB 6 6 DC P 6 6 DG T DNA/RNA S 15 FT #SUB 7 7 CAR P 5 5 DG T DNA/RNA S 15 FT #HET 5 5 DA P 2 1 NA A S 3 FT #HET 7 7 CAR P 1 576 PPV A S 15 FT #HET 7 7 CAR P 4 577 MG A S 2 CC SEQUENCE 7 AA (ATOM); CC cagtacX CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES cagtacX CC ATOM cagtacX CC ******* SQ SEQUENCE 7 AA; MW; CN; cagtacX // ID 3MDAD STANDARD; PRT; 4 AA. DT CONVERTED FROM PDB (SEQRES) 3MDA DE DNA (5'-D(P*GP*CP*CP*G)-3') OS syntetic CC EXPDTA X-RAY DIFFRACTION CC RESOLU 2.030 CC R-Factor 0.200 FT #SUB 1 1 DG D 17 267 TYR A Protein S 1 FT #SUB 1 1 DG D 24 274 TRP A Protein S 10 FT #SUB 1 1 DG D 25 275 ARG A Protein S 12 FT #SUB 1 1 DG D 28 278 GLY A Protein S 7 FT #SUB 1 1 DG D 29 279 TYR A Protein S 8 FT #SUB 1 1 DG D 58 308 ARG A Protein S 11 FT #SUB 1 1 DG D 59 309 MET A Protein S 5 FT #SUB 1 1 DG D 62 312 LYS A Protein S 5 FT #SUB 2 2 DC D 54 304 GLY A Protein S 9 FT #SUB 2 2 DC D 55 305 ILE A Protein S 1 FT #SUB 2 2 DC D 56 306 GLY A Protein S 4 FT #SUB 2 2 DC D 58 308 ARG A Protein S 6 FT #SUB 2 2 DC D 59 309 MET A Protein S 4 FT #SUB 3 3 DC D 53 303 PRO A Protein S 2 FT #SUB 3 3 DC D 54 304 GLY A Protein S 4 FT #SUB 3 3 DC D 55 305 ILE A Protein S 5 FT #SUB 1 1 DG D 3 3 DG T DNA/RNA S 1 FT #SUB 1 1 DG D 4 4 DC T DNA/RNA S 14 FT #SUB 2 2 DC D 2 2 DG T DNA/RNA S 1 FT #SUB 2 2 DC D 3 3 DG T DNA/RNA S 15 FT #SUB 3 3 DC D 2 2 DG T DNA/RNA S 15 FT #SUB 3 3 DC D 3 3 DG T DNA/RNA S 2 FT #SUB 4 4 DG D 1 1 DC T DNA/RNA S 15 FT #SUB 4 4 DG D 2 2 DG T DNA/RNA S 11 CC SEQUENCE 4 AA (ATOM); CC gccg CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES gccg CC ATOM gccg CC **** SQ SEQUENCE 4 AA; MW; CN; gccg //