ID 3H5XA STANDARD; PRT; 510 AA. DT CONVERTED FROM PDB (SEQRES) 3H5X DE RNA dependent RNA polymerase OS Norwalk virus CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.770 CC R-Factor 0.207 FT #SUB 116 116 THR A 3 3 C P DNA/RNA S 2 FT #SUB 306 306 SER A 8 8 G P DNA/RNA S 3 FT #SUB 341 341 TYR A 7 7 G P DNA/RNA S 1 FT #SUB 341 341 TYR A 8 8 G P DNA/RNA A 5 FT #SUB 342 342 GLY A 8 8 G P DNA/RNA B 1 FT #SUB 343 343 ASP A 8 8 G P DNA/RNA S 1 FT #SUB 344 344 ASP A 8 8 G P DNA/RNA S 1 FT #SUB 391 391 LEU A 7 7 G P DNA/RNA A 6 FT #SUB 391 391 LEU A 8 8 G P DNA/RNA S 2 FT #SUB 392 392 ARG A 7 7 G P DNA/RNA S 4 FT #SUB 392 392 ARG A 8 8 G P DNA/RNA S 4 FT #SUB 406 406 LEU A 6 6 G P DNA/RNA S 2 FT #SUB 410 410 SER A 6 6 G P DNA/RNA A 3 FT #SUB 410 410 SER A 7 7 G P DNA/RNA S 3 FT #SUB 413 413 ARG A 6 6 G P DNA/RNA S 6 FT #SUB 413 413 ARG A 7 7 G P DNA/RNA S 7 FT #SUB 414 414 GLN A 5 5 C P DNA/RNA S 7 FT #SUB 414 414 GLN A 6 6 G P DNA/RNA S 1 FT #SUB 419 419 ARG A 5 5 C P DNA/RNA S 4 FT #SUB 435 435 GLN A 4 4 C P DNA/RNA S 1 FT #SUB 20 20 PRO A 1 1 U T DNA/RNA S 3 FT #SUB 23 23 SER A 1 1 U T DNA/RNA S 2 FT #SUB 113 113 LEU A 4 4 C T DNA/RNA S 1 FT #SUB 117 117 THR A 2 2 G T DNA/RNA A 7 FT #SUB 117 117 THR A 3 3 C T DNA/RNA S 5 FT #SUB 118 118 SER A 2 2 G T DNA/RNA A 3 FT #SUB 127 127 LYS A 3 3 C T DNA/RNA S 3 FT #SUB 164 164 ALA A 1 1 U T DNA/RNA S 3 FT #SUB 166 166 LYS A 2 2 G T DNA/RNA S 4 FT #SUB 167 167 ASP A 1 1 U T DNA/RNA S 1 FT #SUB 184 184 LEU A 1 1 U T DNA/RNA S 1 FT #SUB 184 184 LEU A 2 2 G T DNA/RNA S 9 FT #SUB 185 185 TRP A 2 2 G T DNA/RNA B 1 FT #SUB 186 186 GLY A 2 2 G T DNA/RNA B 5 FT #SUB 187 187 SER A 2 2 G T DNA/RNA A 3 FT #SUB 192 192 MET A 2 2 G T DNA/RNA S 1 FT #SUB 192 192 MET A 3 3 C T DNA/RNA S 2 FT #SUB 207 207 LYS A 5 5 C T DNA/RNA S 3 FT #SUB 207 207 LYS A 6 6 G T DNA/RNA S 1 FT #SUB 217 217 VAL A 5 5 C T DNA/RNA S 2 FT #SUB 218 218 GLY A 5 5 C T DNA/RNA B 5 FT #SUB 218 218 GLY A 6 6 G T DNA/RNA B 2 FT #SUB 219 219 MET A 5 5 C T DNA/RNA B 1 FT #SUB 219 219 MET A 6 6 G T DNA/RNA B 3 FT #SUB 220 220 ASN A 6 6 G T DNA/RNA A 8 FT #SUB 220 220 ASN A 7 7 G T DNA/RNA S 3 FT #SUB 300 300 SER A 2 2 G T DNA/RNA A 2 FT #SUB 301 301 GLY A 2 2 G T DNA/RNA B 9 FT #SUB 301 301 GLY A 3 3 C T DNA/RNA B 3 FT #SUB 302 302 VAL A 3 3 C T DNA/RNA B 1 FT #SUB 303 303 PRO A 3 3 C T DNA/RNA B 2 FT #SUB 304 304 CYS A 3 3 C T DNA/RNA B 1 FT #SUB 341 341 TYR A 5 5 C T DNA/RNA S 3 FT #SUB 422 422 ASN A 1 1 U T DNA/RNA S 4 FT #SUB 438 438 ILE A 9 9 C T DNA/RNA S 2 FT #SUB 439 439 GLN A 8 8 G T DNA/RNA A 2 FT #SUB 439 439 GLN A 9 9 C T DNA/RNA S 8 FT #SUB 442 442 SER A 7 7 G T DNA/RNA S 1 FT #HET 28 28 PHE A 7 517 GOL A S 2 FT #HET 30 30 ARG A 6 516 GOL A S 5 FT #HET 36 36 LEU A 6 516 GOL A S 2 FT #HET 52 52 ARG A 6 516 GOL A S 2 FT #HET 99 99 ASP A 4 514 MN A A 4 FT #HET 114 114 ASP A 9 509 GOL T S 1 FT #HET 117 117 THR A 9 509 GOL T S 1 FT #HET 166 166 LYS A 5 515 CSG A S 2 FT #HET 166 166 LYS A 9 509 GOL T S 1 FT #HET 169 169 LEU A 7 517 GOL A S 2 FT #HET 182 182 ARG A 5 515 CSG A S 7 FT #HET 205 205 GLU A 4 514 MN A S 3 FT #HET 209 209 HIS A 4 514 MN A S 3 FT #HET 241 241 ALA A 3 513 MN A B 1 FT #HET 243 243 TYR A 1 511 MN A B 2 FT #HET 243 243 TYR A 5 515 CSG A B 2 FT #HET 244 244 SER A 5 515 CSG A A 3 FT #HET 245 245 ARG A 5 515 CSG A B 4 FT #HET 246 246 TRP A 5 515 CSG A A 2 FT #HET 247 247 ASP A 5 515 CSG A A 16 FT #HET 256 256 ALA A 8 518 GOL A A 3 FT #HET 259 259 LEU A 8 518 GOL A S 1 FT #HET 260 260 GLU A 8 518 GOL A A 13 FT #HET 263 263 VAL A 8 518 GOL A S 1 FT #HET 273 273 GLN A 8 518 GOL A S 2 FT #HET 276 276 ALA A 8 518 GOL A S 1 FT #HET 300 300 SER A 5 515 CSG A S 6 FT #HET 305 305 THR A 5 515 CSG A S 2 FT #HET 309 309 ASN A 5 515 CSG A S 1 FT #HET 343 343 ASP A 1 511 MN A S 3 FT #HET 343 343 ASP A 2 512 MN A S 3 FT #HET 343 343 ASP A 5 515 CSG A S 11 FT #HET 344 344 ASP A 2 512 MN A B 1 FT #HET 344 344 ASP A 3 513 MN A S 3 FT #HET 413 413 ARG A 7 517 GOL A S 6 FT #HET 414 414 GLN A 7 517 GOL A B 2 FT #HET 417 417 TRP A 7 517 GOL A B 4 FT #HET 418 418 THR A 7 517 GOL A B 4 FT #HET 419 419 ARG A 7 517 GOL A A 8 FT #HET 426 426 PRO A 6 516 GOL A S 1 FT #HET 427 427 SER A 6 516 GOL A A 3 FT DISORDER 1 5 FT DISORDER 371 377 FT DISORDER 466 471 FT DISORDER 489 510 CC SEQUENCE 470 AA (ATOM); CC GTYCGAPILG PGSAPKLSTK TKFWRSSTAP LPPGTYEPAY LGGKDPRVKG GPSLQQVMRD CC QLKPFTEPRG KPPKPSVLEA AKKTIINVLE QTIDPPDKWS FAQACASLDK TTSSGHPHHM CC RKNDCWNGES FTGKLADQAS KANLMFEEGK NMTPVYTGAL KDELVKTDKI YGKIKKRLLW CC GSDLATMIRC ARAFGGLMDE LKTHCVTLPI RVGMNMNEDG PIIFERHSRY RYHYDADYSR CC WDSTQQRAVL AAALEIMVKF SSEPHLAQVV AEDLLSPSVV DVGDFTISIN EGLPSGVPCT CC SQWNSIAHWL LTLCALSEVT NLSPDIIQAN SLFSFYGDDE IVSTDIKLDP EKLTAKLKEY CC GLKPTPLVIS EDLNGLTFLR RTVTRDPAGW FGKLEQSSIL RQMYWTRGPN HEDPSETMIP CC HSQRPIQLMS LLGEAALHGP AFYSKISKLV IAEDFYVPRQ EPMFRWMRFS CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES GSDSKGTYCGAPILGPGSAPKLSTKTKFWRSSTAPLPPGTYEPAYLGGKD CC ATOM -----GTYCGAPILGPGSAPKLSTKTKFWRSSTAPLPPGTYEPAYLGGKD CC ********************************************* CC SEQRES PRVKGGPSLQQVMRDQLKPFTEPRGKPPKPSVLEAAKKTIINVLEQTIDP CC ATOM PRVKGGPSLQQVMRDQLKPFTEPRGKPPKPSVLEAAKKTIINVLEQTIDP CC ************************************************** CC SEQRES PDKWSFAQACASLDKTTSSGHPHHMRKNDCWNGESFTGKLADQASKANLM CC ATOM PDKWSFAQACASLDKTTSSGHPHHMRKNDCWNGESFTGKLADQASKANLM CC ************************************************** CC SEQRES FEEGKNMTPVYTGALKDELVKTDKIYGKIKKRLLWGSDLATMIRCARAFG CC ATOM FEEGKNMTPVYTGALKDELVKTDKIYGKIKKRLLWGSDLATMIRCARAFG CC ************************************************** CC SEQRES GLMDELKTHCVTLPIRVGMNMNEDGPIIFERHSRYRYHYDADYSRWDSTQ CC ATOM GLMDELKTHCVTLPIRVGMNMNEDGPIIFERHSRYRYHYDADYSRWDSTQ CC ************************************************** CC SEQRES QRAVLAAALEIMVKFSSEPHLAQVVAEDLLSPSVVDVGDFTISINEGLPS CC ATOM QRAVLAAALEIMVKFSSEPHLAQVVAEDLLSPSVVDVGDFTISINEGLPS CC ************************************************** CC SEQRES GVPCTSQWNSIAHWLLTLCALSEVTNLSPDIIQANSLFSFYGDDEIVSTD CC ATOM GVPCTSQWNSIAHWLLTLCALSEVTNLSPDIIQANSLFSFYGDDEIVSTD CC ************************************************** CC SEQRES IKLDPEKLTAKLKEYGLKPTRPDKTEGPLVISEDLNGLTFLRRTVTRDPA CC ATOM IKLDPEKLTAKLKEYGLKPT-------PLVISEDLNGLTFLRRTVTRDPA CC ******************** *********************** CC SEQRES GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQLMSLLGEAALH CC ATOM GWFGKLEQSSILRQMYWTRGPNHEDPSETMIPHSQRPIQLMSLLGEAALH CC ************************************************** CC SEQRES GPAFYSKISKLVIAELKEGGMDFYVPRQEPMFRWMRFSDLSTWEGDRNLA CC ATOM GPAFYSKISKLVIAE------DFYVPRQEPMFRWMRFS------------ CC *************** ***************** CC SEQRES PSFVNEDGVE CC ATOM ---------- CC SQ SEQUENCE 510 AA; MW; CN; GSDSKGTYCG APILGPGSAP KLSTKTKFWR SSTAPLPPGT YEPAYLGGKD PRVKGGPSLQ QVMRDQLKPF TEPRGKPPKP SVLEAAKKTI INVLEQTIDP PDKWSFAQAC ASLDKTTSSG HPHHMRKNDC WNGESFTGKL ADQASKANLM FEEGKNMTPV YTGALKDELV KTDKIYGKIK KRLLWGSDLA TMIRCARAFG GLMDELKTHC VTLPIRVGMN MNEDGPIIFE RHSRYRYHYD ADYSRWDSTQ QRAVLAAALE IMVKFSSEPH LAQVVAEDLL SPSVVDVGDF TISINEGLPS GVPCTSQWNS IAHWLLTLCA LSEVTNLSPD IIQANSLFSF YGDDEIVSTD IKLDPEKLTA KLKEYGLKPT RPDKTEGPLV ISEDLNGLTF LRRTVTRDPA GWFGKLEQSS ILRQMYWTRG PNHEDPSETM IPHSQRPIQL MSLLGEAALH GPAFYSKISK LVIAELKEGG MDFYVPRQEP MFRWMRFSDL STWEGDRNLA PSFVNEDGVE // ID 3H5XP STANDARD; PRT; 8 AA. DT CONVERTED FROM PDB (SEQRES) 3H5X DE 5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3' OS syntetic CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.770 CC R-Factor 0.207 FT #SUB 3 3 C P 116 116 THR A Protein S 2 FT #SUB 4 4 C P 435 435 GLN A Protein S 1 FT #SUB 5 5 C P 414 414 GLN A Protein S 7 FT #SUB 5 5 C P 419 419 ARG A Protein S 4 FT #SUB 6 6 G P 406 406 LEU A Protein S 2 FT #SUB 6 6 G P 410 410 SER A Protein S 3 FT #SUB 6 6 G P 413 413 ARG A Protein S 6 FT #SUB 6 6 G P 414 414 GLN A Protein S 1 FT #SUB 7 7 G P 341 341 TYR A Protein S 1 FT #SUB 7 7 G P 391 391 LEU A Protein S 6 FT #SUB 7 7 G P 392 392 ARG A Protein S 4 FT #SUB 7 7 G P 410 410 SER A Protein S 3 FT #SUB 7 7 G P 413 413 ARG A Protein S 7 FT #SUB 8 8 G P 306 306 SER A Protein S 3 FT #SUB 8 8 G P 341 341 TYR A Protein S 5 FT #SUB 8 8 G P 342 342 GLY A Protein S 1 FT #SUB 8 8 G P 343 343 ASP A Protein S 1 FT #SUB 8 8 G P 344 344 ASP A Protein S 1 FT #SUB 8 8 G P 391 391 LEU A Protein S 2 FT #SUB 8 8 G P 392 392 ARG A Protein S 4 FT #SUB 2 2 G P 9 9 C T DNA/RNA S 9 FT #SUB 3 3 C P 8 8 G T DNA/RNA S 15 FT #SUB 3 3 C P 9 9 C T DNA/RNA S 1 FT #SUB 4 4 C P 7 7 G T DNA/RNA S 15 FT #SUB 4 4 C P 8 8 G T DNA/RNA S 18 FT #SUB 5 5 C P 6 6 G T DNA/RNA S 15 FT #SUB 5 5 C P 7 7 G T DNA/RNA S 18 FT #SUB 6 6 G P 5 5 C T DNA/RNA S 15 FT #SUB 6 6 G P 6 6 G T DNA/RNA S 33 FT #SUB 7 7 G P 4 4 C T DNA/RNA S 15 FT #SUB 7 7 G P 5 5 C T DNA/RNA S 18 FT #SUB 8 8 G P 2 2 G T DNA/RNA S 1 FT #SUB 8 8 G P 3 3 C T DNA/RNA S 15 FT #SUB 8 8 G P 4 4 C T DNA/RNA S 10 FT #HET 5 5 C P 7 517 GOL A S 6 FT #HET 6 6 G P 7 517 GOL A S 7 FT #HET 8 8 G P 2 512 MN A S 2 FT #HET 8 8 G P 5 515 CSG A S 30 FT DISORDER 1 1 CC SEQUENCE 7 AA (ATOM); CC gcccggg CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES ugcccggg CC ATOM -gcccggg CC ******* SQ SEQUENCE 8 AA; MW; CN; ugcccggg // ID 3H5XT STANDARD; PRT; 9 AA. DT CONVERTED FROM PDB (SEQRES) 3H5X DE 5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3' OS syntetic CC EXPDTA X-RAY DIFFRACTION CC RESOLU 1.770 CC R-Factor 0.207 FT #SUB 1 1 U T 20 20 PRO A Protein S 3 FT #SUB 1 1 U T 23 23 SER A Protein S 2 FT #SUB 1 1 U T 164 164 ALA A Protein S 3 FT #SUB 1 1 U T 167 167 ASP A Protein S 1 FT #SUB 1 1 U T 184 184 LEU A Protein S 1 FT #SUB 1 1 U T 422 422 ASN A Protein S 4 FT #SUB 2 2 G T 117 117 THR A Protein S 7 FT #SUB 2 2 G T 118 118 SER A Protein S 3 FT #SUB 2 2 G T 166 166 LYS A Protein S 4 FT #SUB 2 2 G T 184 184 LEU A Protein S 9 FT #SUB 2 2 G T 185 185 TRP A Protein S 1 FT #SUB 2 2 G T 186 186 GLY A Protein S 5 FT #SUB 2 2 G T 187 187 SER A Protein S 3 FT #SUB 2 2 G T 192 192 MET A Protein S 1 FT #SUB 2 2 G T 300 300 SER A Protein S 2 FT #SUB 2 2 G T 301 301 GLY A Protein S 9 FT #SUB 3 3 C T 117 117 THR A Protein S 5 FT #SUB 3 3 C T 127 127 LYS A Protein S 3 FT #SUB 3 3 C T 192 192 MET A Protein S 2 FT #SUB 3 3 C T 301 301 GLY A Protein S 3 FT #SUB 3 3 C T 302 302 VAL A Protein S 1 FT #SUB 3 3 C T 303 303 PRO A Protein S 2 FT #SUB 3 3 C T 304 304 CYS A Protein S 1 FT #SUB 4 4 C T 113 113 LEU A Protein S 1 FT #SUB 5 5 C T 207 207 LYS A Protein S 3 FT #SUB 5 5 C T 217 217 VAL A Protein S 2 FT #SUB 5 5 C T 218 218 GLY A Protein S 5 FT #SUB 5 5 C T 219 219 MET A Protein S 1 FT #SUB 5 5 C T 341 341 TYR A Protein S 3 FT #SUB 6 6 G T 207 207 LYS A Protein S 1 FT #SUB 6 6 G T 218 218 GLY A Protein S 2 FT #SUB 6 6 G T 219 219 MET A Protein S 3 FT #SUB 6 6 G T 220 220 ASN A Protein S 8 FT #SUB 7 7 G T 220 220 ASN A Protein S 3 FT #SUB 7 7 G T 442 442 SER A Protein S 1 FT #SUB 8 8 G T 439 439 GLN A Protein S 2 FT #SUB 9 9 C T 438 438 ILE A Protein S 2 FT #SUB 9 9 C T 439 439 GLN A Protein S 8 FT #SUB 2 2 G T 8 8 G P DNA/RNA S 1 FT #SUB 3 3 C T 8 8 G P DNA/RNA S 15 FT #SUB 4 4 C T 7 7 G P DNA/RNA S 15 FT #SUB 4 4 C T 8 8 G P DNA/RNA S 10 FT #SUB 5 5 C T 6 6 G P DNA/RNA S 15 FT #SUB 5 5 C T 7 7 G P DNA/RNA S 18 FT #SUB 6 6 G T 5 5 C P DNA/RNA S 15 FT #SUB 6 6 G T 6 6 G P DNA/RNA S 33 FT #SUB 7 7 G T 4 4 C P DNA/RNA S 15 FT #SUB 7 7 G T 5 5 C P DNA/RNA S 18 FT #SUB 8 8 G T 3 3 C P DNA/RNA S 15 FT #SUB 8 8 G T 4 4 C P DNA/RNA S 18 FT #SUB 9 9 C T 2 2 G P DNA/RNA S 9 FT #SUB 9 9 C T 3 3 C P DNA/RNA S 1 FT #HET 2 2 G T 5 515 CSG A S 15 FT #HET 2 2 G T 9 509 GOL T S 9 FT #HET 3 3 C T 9 509 GOL T S 7 FT #HET 4 4 C T 9 509 GOL T S 3 CC SEQUENCE 9 AA (ATOM); CC ugcccgggc CC !---- CC ALIGNMENT OF SEQRES AND ATOMRES CC SEQRES ugcccgggc CC ATOM ugcccgggc CC ********* SQ SEQUENCE 9 AA; MW; CN; ugcccgggc //