data_RU2 # _chem_comp.id RU2 _chem_comp.name "pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)ruthenium" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C H10 O6 Ru" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 6 _chem_comp.pdbx_initial_date 2017-06-27 _chem_comp.pdbx_modified_date 2017-07-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 219.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RU2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5OB6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RU2 RU RU1 RU 0 0 N N N 15.942 -25.578 -5.957 0.144 -0.001 -0.000 RU RU2 1 RU2 O3 O1 O 1 1 N N N 15.166 -24.096 -7.674 0.106 0.297 -1.816 O3 RU2 2 RU2 C2 C1 C 0 1 N N N 17.622 -24.779 -5.563 -1.686 0.016 0.041 C2 RU2 3 RU2 O2 O2 O 1 1 N N N 18.518 -24.260 -5.362 -2.689 0.026 0.064 O2 RU2 4 RU2 O1 O3 O 1 1 N N N 16.834 -26.965 -7.636 0.168 1.815 0.297 O1 RU2 5 RU2 O5 O4 O 1 1 N N N 16.668 -27.019 -4.304 0.182 -0.298 1.815 O5 RU2 6 RU2 O4 O5 O 1 1 N N N 13.799 -26.655 -6.487 1.983 -0.018 -0.041 O4 RU2 7 RU2 H1 H1 H 0 1 N N N 14.311 -24.380 -7.976 0.730 0.971 -2.117 H1 RU2 8 RU2 H5 H5 H 0 1 N N N 17.252 -27.718 -7.236 1.055 2.199 0.314 H5 RU2 9 RU2 H6 H6 H 0 1 N N N 17.538 -26.763 -4.020 0.205 -1.233 2.060 H6 RU2 10 RU2 H7 H7 H 0 1 N N N 13.685 -27.422 -5.938 2.388 0.846 0.118 H7 RU2 11 RU2 H10 H10 H 0 1 N N N 16.135 -27.258 -8.209 -0.465 2.310 -0.242 H10 RU2 12 RU2 H11 H11 H 0 1 N N N 13.090 -26.043 -6.328 2.382 -0.739 0.465 H11 RU2 13 RU2 H9 H9 H 0 1 N N N 15.102 -23.214 -7.326 0.113 -0.512 -2.347 H9 RU2 14 RU2 H8 H8 H 0 1 N N N 16.070 -26.982 -3.567 0.822 0.249 2.290 H8 RU2 15 RU2 O6 O6 O 1 1 N Y N ? ? ? 0.120 -1.816 -0.297 O6 RU2 16 RU2 H2 H2 H 0 1 N N N ? ? ? -0.522 -2.098 -0.963 H2 RU2 17 RU2 H3 H3 H 0 1 N N N ? ? ? 0.998 -2.208 -0.406 H3 RU2 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RU2 RU O3 SING N N 1 RU2 RU C2 SING N N 2 RU2 RU O1 SING N N 3 RU2 RU O5 SING N N 4 RU2 C2 O2 TRIP N N 5 RU2 RU O4 SING N N 6 RU2 O3 H1 SING N N 7 RU2 O1 H5 SING N N 8 RU2 O5 H6 SING N N 9 RU2 O4 H7 SING N N 10 RU2 O1 H10 SING N N 11 RU2 O4 H11 SING N N 12 RU2 O3 H9 SING N N 13 RU2 O5 H8 SING N N 14 RU2 RU O6 SING N N 15 RU2 O6 H2 SING N N 16 RU2 O6 H3 SING N N 17 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RU2 InChI InChI 1.03 InChI=1S/CO.5H2O.Ru/c1-2;;;;;;/h;5*1H2;/q+1;;;;;;+5 RU2 InChIKey InChI 1.03 XGGVDGPXQXWURT-UHFFFAOYSA-N RU2 SMILES_CANONICAL CACTVS 3.385 "[OH2+][Ru]([OH2+])([OH2+])([OH2+])([OH2+])C#[O+]" RU2 SMILES CACTVS 3.385 "[OH2+][Ru]([OH2+])([OH2+])([OH2+])([OH2+])C#[O+]" RU2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C(#[O+])[Ru]([OH2+])([OH2+])([OH2+])([OH2+])[OH2+]" RU2 SMILES "OpenEye OEToolkits" 2.0.6 "C(#[O+])[Ru]([OH2+])([OH2+])([OH2+])([OH2+])[OH2+]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RU2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)ruthenium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RU2 "Create component" 2017-06-27 EBI RU2 "Initial release" 2017-07-26 RCSB #