data_ARB # _chem_comp.id ARB _chem_comp.name beta-L-arabinopyranose _chem_comp.type "L-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C5 H10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "beta-L-arabinose; L-arabinose; arabinose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 150.130 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ARB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ABP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 ARB beta-L-arabinose PDB ? 2 ARB L-arabinose PDB ? 3 ARB arabinose PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal ARB C1 C1 C 0 1 N N S 14.357 56.989 55.217 0.351 0.436 1.398 C1 ARB 1 ARB C2 C2 C 0 1 N N R 12.945 57.299 54.858 -0.830 0.547 0.432 C2 ARB 2 ARB C3 C3 C 0 1 N N S 12.418 56.421 53.813 -0.716 -0.555 -0.628 C3 ARB 3 ARB C4 C4 C 0 1 N N S 13.334 56.515 52.550 0.669 -0.466 -1.276 C4 ARB 4 ARB C5 C5 C 0 1 N N N 14.807 56.069 52.893 1.737 -0.501 -0.181 C5 ARB 5 ARB O1 O1 O 0 1 N Y N 14.423 55.788 55.895 0.343 -0.855 2.010 O1 ARB 6 ARB O2 O2 O 0 1 N N N 12.101 56.997 56.028 -2.054 0.393 1.154 O2 ARB 7 ARB O3 O3 O 0 1 N N N 11.051 56.723 53.408 -1.728 -0.373 -1.620 O3 ARB 8 ARB O4 O4 O 0 1 N N N 13.323 57.860 51.926 0.776 0.754 -2.010 O4 ARB 9 ARB O5 O5 O 0 1 N N N 15.218 56.810 54.055 1.574 0.617 0.688 O5 ARB 10 ARB H1 H1 H 0 1 N N N 14.700 57.859 55.824 0.263 1.202 2.169 H1 ARB 11 ARB H2 H2 H 0 1 N N N 12.929 58.361 54.521 -0.814 1.523 -0.052 H2 ARB 12 ARB H3 H3 H 0 1 N N N 12.408 55.396 54.252 -0.838 -1.530 -0.156 H3 ARB 13 ARB H4 H4 H 0 1 N N N 12.909 55.811 51.796 0.811 -1.311 -1.951 H4 ARB 14 ARB H51 H51 H 0 1 N N N 14.910 54.966 53.019 1.639 -1.423 0.391 H51 ARB 15 ARB H52 H52 H 0 1 N N N 15.508 56.181 52.033 2.726 -0.463 -0.638 H52 ARB 16 ARB HO1 HO1 H 0 1 N Y N 15.323 55.590 56.124 1.098 -0.883 2.613 HO1 ARB 17 ARB HO2 HO2 H 0 1 N Y N 11.200 57.194 55.799 -2.081 1.102 1.812 HO2 ARB 18 ARB HO3 HO3 H 0 1 N Y N 10.708 56.152 52.729 -1.620 -1.086 -2.264 HO3 ARB 19 ARB HO4 HO4 H 0 1 N Y N 13.879 57.917 51.158 1.662 0.770 -2.398 HO4 ARB 20 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARB C1 C2 SING N N 1 ARB C1 O1 SING N N 2 ARB C1 O5 SING N N 3 ARB C1 H1 SING N N 4 ARB C2 C3 SING N N 5 ARB C2 O2 SING N N 6 ARB C2 H2 SING N N 7 ARB C3 C4 SING N N 8 ARB C3 O3 SING N N 9 ARB C3 H3 SING N N 10 ARB C4 C5 SING N N 11 ARB C4 O4 SING N N 12 ARB C4 H4 SING N N 13 ARB C5 O5 SING N N 14 ARB C5 H51 SING N N 15 ARB C5 H52 SING N N 16 ARB O1 HO1 SING N N 17 ARB O2 HO2 SING N N 18 ARB O3 HO3 SING N N 19 ARB O4 HO4 SING N N 20 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor ARB SMILES ACDLabs 10.04 "OC1C(O)COC(O)C1O" ARB SMILES_CANONICAL CACTVS 3.341 "O[C@H]1CO[C@H](O)[C@H](O)[C@H]1O" ARB SMILES CACTVS 3.341 "O[CH]1CO[CH](O)[CH](O)[CH]1O" ARB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@@H]([C@@H]([C@H]([C@H](O1)O)O)O)O" ARB SMILES "OpenEye OEToolkits" 1.5.0 "C1C(C(C(C(O1)O)O)O)O" ARB InChI InChI 1.03 "InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5-/m0/s1" ARB InChIKey InChI 1.03 SRBFZHDQGSBBOR-KLVWXMOXSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ARB "SYSTEMATIC NAME" ACDLabs 10.04 beta-L-arabinopyranose ARB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3R,4S,5S)-oxane-2,3,4,5-tetrol" ARB "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 LArapb ARB "COMMON NAME" GMML 1.0 b-L-arabinopyranose ARB "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 b-L-Arap ARB "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Ara # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support ARB "CARBOHYDRATE ISOMER" L PDB ? ARB "CARBOHYDRATE RING" pyranose PDB ? ARB "CARBOHYDRATE ANOMER" beta PDB ? ARB "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site ARB "Create component" 1999-07-08 RCSB ARB "Modify descriptor" 2011-06-04 RCSB ARB "Other modification" 2019-08-12 RCSB ARB "Other modification" 2019-12-19 RCSB ARB "Other modification" 2020-07-03 RCSB ARB "Modify name" 2020-07-17 RCSB ARB "Modify synonyms" 2020-07-17 RCSB ##