data_9VD # _chem_comp.id 9VD _chem_comp.name "(2S,3S)-2-amino-3-hydroxybutanal" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C4 H9 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-06-13 _chem_comp.pdbx_modified_date 2017-08-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 103.120 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details 5W4K _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 9VD CDF C1 C 0 1 N N N 64.588 -60.777 -15.215 -1.339 -0.743 -0.179 CDF 9VD 1 9VD ODK O1 O 0 1 N N N 63.599 -60.042 -15.146 -2.386 -0.366 0.290 ODK 9VD 2 9VD CDE C2 C 0 1 N N S 65.395 -60.925 -16.518 -0.236 0.248 -0.452 CDE 9VD 3 9VD CDR C3 C 0 1 N N S 64.905 -62.166 -17.288 1.004 -0.133 0.358 CDR 9VD 4 9VD CDS C4 C 0 1 N N N 65.872 -63.339 -17.074 2.123 0.872 0.081 CDS 9VD 5 9VD ODT O2 O 0 1 N N N 64.783 -61.871 -18.691 1.436 -1.442 -0.019 ODT 9VD 6 9VD NDD N1 N 0 1 N N N 66.837 -61.058 -16.230 -0.680 1.594 -0.065 NDD 9VD 7 9VD H1 H1 H 0 1 N N N 64.895 -61.330 -14.340 -1.191 -1.790 -0.398 H1 9VD 8 9VD H2 H2 H 0 1 N N N 65.225 -60.034 -17.141 0.006 0.237 -1.515 H2 9VD 9 9VD H3 H3 H 0 1 N N N 63.922 -62.453 -16.886 0.761 -0.123 1.421 H3 9VD 10 9VD H4 H4 H 0 1 N N N 65.511 -64.218 -17.628 1.794 1.871 0.368 H4 9VD 11 9VD H5 H5 H 0 1 N N N 66.872 -63.061 -17.438 3.007 0.600 0.658 H5 9VD 12 9VD H6 H6 H 0 1 N N N 65.926 -63.579 -16.002 2.366 0.862 -0.982 H6 9VD 13 9VD H7 H7 H 0 1 N N N 64.480 -62.644 -19.153 1.669 -1.526 -0.954 H7 9VD 14 9VD H8 H8 H 0 1 N N N 67.341 -61.153 -17.088 -1.459 1.895 -0.631 H8 9VD 15 9VD H9 H9 H 0 1 N Y N 67.156 -60.244 -15.744 -0.911 1.630 0.917 H9 9VD 16 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 9VD CDF ODK DOUB N N 1 9VD CDF CDE SING N N 2 9VD CDE CDR SING N N 3 9VD CDE NDD SING N N 4 9VD CDR ODT SING N N 5 9VD CDR CDS SING N N 6 9VD CDF H1 SING N N 7 9VD CDE H2 SING N N 8 9VD CDR H3 SING N N 9 9VD CDS H4 SING N N 10 9VD CDS H5 SING N N 11 9VD CDS H6 SING N N 12 9VD ODT H7 SING N N 13 9VD NDD H8 SING N N 14 9VD NDD H9 SING N N 15 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 9VD SMILES ACDLabs 12.01 "C(=O)C(C(O)C)N" 9VD InChI InChI 1.03 "InChI=1S/C4H9NO2/c1-3(7)4(5)2-6/h2-4,7H,5H2,1H3/t3-,4+/m0/s1" 9VD InChIKey InChI 1.03 ORDNBIQZKXYGTM-IUYQGCFVSA-N 9VD SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)[C@H](N)C=O" 9VD SMILES CACTVS 3.385 "C[CH](O)[CH](N)C=O" 9VD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC([C@@H](C=O)N)O" 9VD SMILES "OpenEye OEToolkits" 2.0.6 "CC(C(C=O)N)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 9VD "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,3S)-2-amino-3-hydroxybutanal" 9VD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-azanyl-3-oxidanyl-butanal" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 9VD "Create component" 2017-06-13 RCSB 9VD "Initial release" 2017-08-30 RCSB #